Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0881 ATGAGCGTCATCGACATTCTAACCAGAGTTGATTCGATCTGCAAGAAGTATGACAGATACGACGTCGAAAAGCACAAGGATTCCAATATCTCCGGCGACGATGCCTTTGCTCGGCTCTATGCCACTGTTGAAGCCGACATCGAGGCCGCGCTTGAGAAAGCAGAAACCGCTTCCAAGGAGAAAAATAGGGCATCTGCCGTAGCCATCAATGCCGAGCTTCGTCGTGCCAAGGCTCGGTTGCTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTGTAAAGAAGgTAAAGGGGCTTTCATCAGAAGAATTTGCTGCCCGGAACGATTTGGTTCTTGCACTGCCAGAGAGGATCCAAGCTATCCCAGATGGGACCCCTGCTGCACCCAAAAAAACAGGAGGTTGGGCAGCTTCTGCTTCACGTACTGAAATTAAGTTTGATTCAGATGGGCAATTTGATGGTGAATACTTCCAACAAACTGAACAATCAAGTCAATTCAGGCAGGAGTTTGAAATGCGTAGAATGAAGCAGGATCAAGGTTTGGATATGATCTCAGAAGGCTTGGACACGTTGAAAAACATGGCACATGATATGAATGAGGAATTGGACAGACAAGTACCACTGATGGATGAGATTGACACTAAGGTGGACAAAGCATCCTCTGATCTAAAGAATACCAATGTCAGACTTAAAAACACAGTGAACCAGCTTCGGTCCAGTCGAAATTTCTGTATTGATATTGTattattgattataattttGGGAATTGCTGCCTATCTATACAAGTAA 786 0.4491 MSVIDILTRVDSICKKYDRYDVEKHKDSNISGDDAFARLYATVEADIEAALEKAETASKEKNRASAVAINAELRRAKARLLEEVPKLQRLAVKKVKGLSSEEFAARNDLVLALPERIQAIPDGTPAAPKKTGGWAASASRTEIKFDSDGQFDGEYFQQTEQSSQFRQEFEMRRMKQDQGLDMISEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKNTVNQLRSSRNFCIDIVLLIIILGIAAYLYK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0881 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Sto8g0881 261 CDD SNARE_Qc 175 230 - -
Sto8g0881 261 Pfam SNARE domain 207 256 IPR000727 -
Sto8g0881 261 Coils Coil 40 67 - -
Sto8g0881 261 SMART tSNARE_6 166 232 IPR000727 -
Sto8g0881 261 Coils Coil 70 90 - -
Sto8g0881 261 Gene3D - 170 231 - -
Sto8g0881 261 PANTHER SYNTAXIN-73 1 260 - -
Sto8g0881 261 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Sto8g0881 261 SUPERFAMILY SNARE fusion complex 165 230 - -
Sto8g0881 261 PANTHER SYNTAXIN 1 260 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0881 Sto-Chr8 5575318 5577376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0881 1 260 SNARE and Associated Proteins AT3G09740 77.863 3.59e-154 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0881 K08506 - gmx:100819272 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0881 8 5575318 5577376 Sto8g0881 8 5575318 5577376 ECH