Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0877 ATGTTGGTACTTTCCCTCATATTCTCAAGCGCCATCTTTATCCCCTTTACATTGTTCCTCTGCTTTTCCAGCACCGCCGTTACGATCGCCACCACTGAATTCGACTTTGGCACCATAACTTTGAATAGCCTCAAGCTTCTCGGAGATGCCCACTTGAGCAATGCCACTGTCAGGCTCACTAAGGACCTCACCGTCCCCATCTCCGGTGCCGGCAGAGCTCTCTACTCCAAACCCGTCAGATTCCGGCAGCCCGGCTCTAGCTTTCCGGCGAGTTTCAAGACTTTCTTTTCGTTTTCAGTTAGCAATCTGAATCCATCGTCCATCGGCGGTGGGCTTGCTTTTCTAATCACGCCGGATGACGAGACCCTCGGCGACGCCGGTGGGTGCCTTGGCCTCCTCAAGGCGGATGACTCTGCTTCAAGCTTTCTGGCGGTGGAATTCGACACGCTGATGGACGTGGAGTTCAAGGACATCAACGGAAATCATGTGGGTCTGGACCTAAATAGTATGGTTTCAACGCAAGTTGGTGACTTGGAATCCGCCGGGATCGATCTGAAAAGTGGCGATCTAGTGAACGCGTGGATCGAGTACGAAGCCTCAACCAAGGGCTTCAACATCTGGGTTTCCTATTCCAATCTAAAACCACCAGATCCGCTTCTCTCATTCGATCTCGATCTGGATCAGTATGTTAATGACTTTATGTATGTGGGTTTCTCTGGGTCTACGCAGGGCAGCACGGAGGCTCACAGTGTAGAGTGGTGGAGCTTTAGTTCTTCCTTCCTCTCCAATTCGCCTTCTGCATCAGCGTCATTGACGCCGCCgcctcctcctccaactctcAGTATGATGAACTCAACTGCTAGTTCTGTCAAATCGCCACCTCCTTCATTGTCCCCTTCACCCTCGACTACTCAGCAAAAGGACACTAAATCCTCCTGCCACAATGAGCTCTGTAGGCAAAATCCAGGAGCCGTCGCAGGGGTTGTGACGGCGGGGGCCTTTGTCTTAGCTTTGTTCGCGGGTGGGTTCATTTGGGTTTACTCCAGAAAGATCAAACGTGTTAAGAAGTCCGATTCACTTGCATCAGAGATCATTAAAATGCCAAAAGAGTTCACCTATAAGGAGCTCAAATCAGCCACCAAGTGCTTCAATGCCAACAGAATAATTGGTCACGGCGCATTTGGAACGGTATACAAGGGTATATTACCAGAGAACGGCGACATCGTTGCGGTGAAGAGATGCAGCCATAGCAGTCAGGGGAAGAACGAATTCTTATCTGAATTATCCATAATCGGGTGCCTCAGACATCGAAATCTAGTTCGGCTTCAAGGATGGTGCCACGAGAAGGGGGAAATTTTACTAGTCTATGACTTAATGCCCAATGGGAGTCTAGATAAAGCGCTATTCGAGGCGAGAACACCTCTGCCATGGCCTCACAGGCGCAAAATTTTGTTAGGCGTAGCATCTGCACTGGCGTACTTACATCAAGAGTGCGAAAATCAGGTAATTCACAGAGACGTGAAGACCAGTAACATAATGCTAGACGAAGGGTTCAATGCTCGATTAGGAGATTTTGGTTTAGCTCGTCAAACGGAACACGACAAATCCCCTGATGCGACGGTGGCAGCAGGAACAATGGGGTACCTGGCTCCGGAATATCTGCTCACAGGTAGAGCGACAGAGAAAACGGACGTGTTCAGTTACGGTGCGGTGGTTCTTGAGGTGGCAAGCGGGAGAAGACCCATAGAGAAAGATGCGACGGCGGGGAAAGTAGGGGTGAGCAGTAATCTGGTGGAGTGGGTGTGGAGTTTGCACCGAGAGGGGAGGTTGCTGATGGCGGCAGATGCGAGACTTGGGGGTGAGTTTGAGGAAGGGGAAATGAGGAGGGTGCTACTAGTTGGGCTTGCTTGCTCTCACCCTGACCCAGCGACTAGGCCCACAATGAGGGGTGTAGTTCAGATGCTGGTGGGTGAAGCTCAAGTACCCATTGTCCCCATAACTAAGCCATCCACTAGTTATACCACGTCCCAACTCTTGATGAGCTTGCAGGACAGTGTGTCTGACTGCAATGGAATAATTGCCATCActacctcctcctcctcctcggaAAACAGCTTTAACGCAGGACATCATATCGGAGATGTGATTAAGAATTCTGAAGCCAGAGGGTTCAATCCTGGGTTAATAGTTCTCATTGTTGTTGGTGGGCTGCTATTGACATTCCTGATCGGAAATTACGTCCTTTACATGTATGCTCAGAAGACACTCCCTCCTAGAAAAAAGAAGCCAGTctcaaagaagaagatgaagagggagAGACTGAAGCAAGGCGTCTCTGCACCTGGAGAGTAG 2352 0.486 MLVLSLIFSSAIFIPFTLFLCFSSTAVTIATTEFDFGTITLNSLKLLGDAHLSNATVRLTKDLTVPISGAGRALYSKPVRFRQPGSSFPASFKTFFSFSVSNLNPSSIGGGLAFLITPDDETLGDAGGCLGLLKADDSASSFLAVEFDTLMDVEFKDINGNHVGLDLNSMVSTQVGDLESAGIDLKSGDLVNAWIEYEASTKGFNIWVSYSNLKPPDPLLSFDLDLDQYVNDFMYVGFSGSTQGSTEAHSVEWWSFSSSFLSNSPSASASLTPPPPPPTLSMMNSTASSVKSPPPSLSPSPSTTQQKDTKSSCHNELCRQNPGAVAGVVTAGAFVLALFAGGFIWVYSRKIKRVKKSDSLASEIIKMPKEFTYKELKSATKCFNANRIIGHGAFGTVYKGILPENGDIVAVKRCSHSSQGKNEFLSELSIIGCLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKDATAGKVGVSSNLVEWVWSLHREGRLLMAADARLGGEFEEGEMRRVLLVGLACSHPDPATRPTMRGVVQMLVGEAQVPIVPITKPSTSYTTSQLLMSLQDSVSDCNGIIAITTSSSSSENSFNAGHHIGDVIKNSEARGFNPGLIVLIVVGGLLLTFLIGNYVLYMYAQKTLPPRKKKPVSKKKMKRERLKQGVSAPGE 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0877 783 Pfam Legume lectin domain 33 265 IPR001220 GO:0030246
Sto8g0877 783 SMART serkin_6 383 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0877 783 Pfam Protein kinase domain 384 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0877 783 PANTHER - 17 706 - -
Sto8g0877 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Sto8g0877 783 MobiDBLite consensus disorder prediction 758 783 - -
Sto8g0877 783 MobiDBLite consensus disorder prediction 267 315 - -
Sto8g0877 783 MobiDBLite consensus disorder prediction 301 315 - -
Sto8g0877 783 Gene3D - 30 271 - -
Sto8g0877 783 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 17 706 - -
Sto8g0877 783 CDD lectin_legume_LecRK_Arcelin_ConA 32 254 IPR001220 GO:0030246
Sto8g0877 783 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 275 IPR013320 -
Sto8g0877 783 MobiDBLite consensus disorder prediction 759 773 - -
Sto8g0877 783 CDD STKc_IRAK 389 655 - -
Sto8g0877 783 SUPERFAMILY Protein kinase-like (PK-like) 365 689 IPR011009 -
Sto8g0877 783 Pfam DNA binding protein S1FA 719 783 IPR006779 GO:0003677|GO:0005634|GO:0006355
Sto8g0877 783 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Sto8g0877 783 ProSiteProfiles Protein kinase domain profile. 383 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0877 783 ProSitePatterns Protein kinases ATP-binding region signature. 389 412 IPR017441 GO:0005524
Sto8g0877 783 Gene3D Phosphorylase Kinase; domain 1 345 458 - -
Sto8g0877 783 Gene3D Transferase(Phosphotransferase) domain 1 459 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0877 Sto-Chr8 5543975 5549612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0877 11 692 Receptor kinase-like Gene Family AT3G53380 69.784 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto8g0877 Pkinase 7.1e-50 CL0016
TF S1Fa-like Sto8g0877 Pkinase 7.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0877 - - jre:108995658 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0877 8 5543975 5549612 Sto8g0877 8 5543975 5549612 ECH