Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0867 TTGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTCTCTAGTGTGAAGAAAGCTCTCAGCCCTGACTCAAAGAAGAGGAAATCGAACAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAGACTTCAGACTCATACTTGGCTTCTGATAAAGCAACACCTCcacctcctcttcctcctccaccaccagaAGAGACTAAATCATTTGATGTTGGGAATGAGATCAATCAAGTTCATGTCGTTGAAGTTGCAACTTCTGTGGATGCTGAGACACCTGTTCCTGTTGTTCAAAGAGCAGCTGTTGCAGTCCAAGCGACAAGAATTTCTCGGTTTGCCGGTAAATCGAAGGAGGAAGTGGCTGCAATAAGAATTCAAACAGCTTTTAGGGGATATTTGgcAAGAAGAGCATCGCGAGCTTTGAGAGGGCTTGTCAGGTTGAAATCTCTTATGGAAGGGCCAGTTGTAAAGCGCCAAGCCATGAGTACCCTTCGATCTATGCAAACTTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGATCAGGATGTTAGAGGAGAATCAGGCTCTGCAGAAGCAGCTCTTACAGAAGCATGCAAAAGAACTTACATCACAGATTGAGGAGGAATGGGATGACAGCCTGCAATCCAAGGAACAAATTGAAGCCAAATTACTACACAAGTATGAGGCTGCTATGAGAAGAGAAAAGGCTATGGCTTATGCTTTCACACATCAGCAAACATGGAAGAACTCATCTAAATCTATAAATCCCATGTTCATGGATCCAACCAATCCTTCCTGGGGGTGGAGCTGGCTGGAAAGATGGATGGCAGCCCGAACATGCGAGAGCCATAGCGCAATGGAGAAAGAATCCAACGATGACCGTTCATCTGTAACTGTAAGAAGTTCAAGCCGCAGCATCAGTGGTGTGGGAGAAATCAGCAAATCATTTGCTCGTTACCAACTCAATTCTGAAAGGCATTCTCCCACAGCCAGCCAAAACGCAGGCTCACCTACCTTCCACTCACATTCTACTCCTTCCAAGCTAACTCCCAGAAAACTCAAGAAAGCAAGCCCAAGGGGCAGCTTTGCAATGGATGATGACAATAAAAGCATGATCAGTGTGCAGTCAGGGAGGATCCGGAGGCATTCCATTGGTGGGTCATCGGTGAGAGACGATGAGAGTCTGGCGAGCTCTCCGGCGGTTCCAAGTTACATGGTGGCAACTCAGTCTGCAAAAGCCAAGTCTAGGACACAGAGTCCTTTGGCAGCAGAGAATGGAACACCAGAGAAGGCGTCCTTTGGGACAGCAAAGAAAAGGCTTTCTTACCCACCTTCACCAGCCAGGCCACCATGGAGACATTCACCAAAGgtagaaaacaaattaaatgcagaAATCACAGTGGGCAATGGTGGGGCTGATTAG 1434 0.4498 LRNAKKMGRKGNWFSSVKKALSPDSKKRKSNKSKKKWFGKQKLETSDSYLASDKATPPPPLPPPPPEETKSFDVGNEINQVHVVEVATSVDAETPVPVVQRAAVAVQATRISRFAGKSKEEVAAIRIQTAFRGYLARRASRALRGLVRLKSLMEGPVVKRQAMSTLRSMQTLARVQSQIRSRRIRMLEENQALQKQLLQKHAKELTSQIEEEWDDSLQSKEQIEAKLLHKYEAAMRREKAMAYAFTHQQTWKNSSKSINPMFMDPTNPSWGWSWLERWMAARTCESHSAMEKESNDDRSSVTVRSSSRSISGVGEISKSFARYQLNSERHSPTASQNAGSPTFHSHSTPSKLTPRKLKKASPRGSFAMDDDNKSMISVQSGRIRRHSIGGSSVRDDESLASSPAVPSYMVATQSAKAKSRTQSPLAAENGTPEKASFGTAKKRLSYPPSPARPPWRHSPKVENKLNAEITVGNGGAD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0867 477 MobiDBLite consensus disorder prediction 1 72 - -
Sto8g0867 477 Pfam IQ calmodulin-binding motif 123 139 IPR000048 GO:0005515
Sto8g0867 477 Pfam Protein of unknown function (DUF4005) 393 452 IPR025064 -
Sto8g0867 477 SMART iq_5 119 141 IPR000048 GO:0005515
Sto8g0867 477 MobiDBLite consensus disorder prediction 288 308 - -
Sto8g0867 477 MobiDBLite consensus disorder prediction 326 350 - -
Sto8g0867 477 PANTHER IQ-DOMAIN 5-RELATED 7 472 - -
Sto8g0867 477 MobiDBLite consensus disorder prediction 405 429 - -
Sto8g0867 477 MobiDBLite consensus disorder prediction 326 477 - -
Sto8g0867 477 MobiDBLite consensus disorder prediction 55 69 - -
Sto8g0867 477 MobiDBLite consensus disorder prediction 372 386 - -
Sto8g0867 477 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Sto8g0867 477 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0867 Sto-Chr8 5504027 5506765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0867 7 476 IQD Protein Family AT5G03040 53.673 4.90e-142 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0867 - - gmx:100800080 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0867 8 5504027 5506765 Sto13g3260 13 36366470 36369318 CCT
Sto8g0867 8 5504027 5506765 Sto8g0867 8 5504027 5506765 ECH