Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0859 ATGGAGAGTAGGCTtctgctcatattctctctcccATACATACTCCTACTTCTCTCTTGCTTATCCTCTGCTCAGAAGCCAGGTTTTGTGAGCTTGGACTGCGGAGGTAAAGAAAAATTCTCTGATGAACTTGGTCTTGATTGGAGTCCTGATGATAAACTTACTTATGGGGAAACAAGCACAATATCAGTTGCAAATGAGACCCGGAAGCAGTACACAACGCTAAGACATTTTCCTGCTGATTCTAGAAAATACTGCTACACGCTTGATGTTGTCAGTAGGACAAGGTATCTACTGAGGGCGTCATTCTTGTATGGGAACTTTGACAATAACAATGTTTATCCCAAATTTGACCTTTCCTTTGGGGCTACACATTGGTGCACAATTGTTATATCTGATGCTAATACTATAGAGATGCGAGAGCTTATATTTCTGGCTACAAGTTCTAAAGTTAATGTATGCTTATCAAATGCAACAACTGGACAACCATTCATATCTACACTTGAACTCCGGCAATTCAATGGTTCGGTTTATTATACACAGTTTGAAGAACAGTTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCTCCAATCAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAACTATCTTGTCGATGTTGCGGTTGGAACTGAGAAAATTTCTACCAATTTACCAGTTGATGTTAACAGTGATGAAATGCCACCAGTGAAAGTGATGCAGACAGCTGTTGTTGGTACAAATGGATCTCTAACTTACAGGTTGAACTTGGATGGTTTTCCAGGGACTGGTTGGGCATTCACCTATTTTGCGGAGATTGAAGATTTGGGTCCTGAGGAATCCAGGAAATTCAGGCTAGTTCTTCCAGGCCAGCCTGATATCAGCAAGGCTGTTGTTAATATCGAAGAAAATGCTCAAGGAAAATATCGTCTTTATGAACCAGGATTTACCAATTTATCTTTACCCTTTGTGCTATCCTTTAGATTTGGCAAGACTTCTGATTCTTCCAGGGGCCCTCTTGTGAATGCTTTGGAGATTAATAAGTATCTGGAGAAAAACGATGGCTCAGTAGATGGAGCAGCTATTTCTGAAGTAATTTCACACTACTCAGCTGATTGGGCACAAGAAGGAGGTGACCCGTGTCTGCCTGTTCCATGGTCATGGGTCCATTGTAGCTCAGATCCACAACCAAGACTAGTTTCAATTTTGCTGTCCAGTAAAAACTTGACTGGAAATGTTCCTTTGGACATCACCAAATTGACTGGTCTTGTCGAACTATGGCTTGATGGAAATATGTTGACTGGATCAATACCTGATTTTACGGGATGCATGGACTTGAAGATTATTCATCTTGAAAACAATCGGTTGACGGGTGAGATCCCTTCCTCTTTGGCGAACCTACCTAATTTGAGGGAATTGTATGTGCAAAATAATATGTTATCTGGAACTGTGCCTTCAGGTCTTCAGAGCAAAGATTTGGTTCTGAAcTACTCTGGAAACATTAATCTTCACAAAGGAAGCAGTAAAAAGAGCCACATGTTTGTTATTATTGGGTCATCAATTGGAGCTGCTGTTCTACTGATAGCTACAATTGCATCTTGCCTGCTGGCTTCTTCCAAGAATGATGCTCCTGCAGAAGTTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAATGCTACTAATAACTTTGAGAAGAAGATCGGTGCTGGAGGTTTTGGAGTTGTTTACTATGGGGTTCTGAAAGATGGAAAAGAGATTGCGGTTAAAGTTCTCATTAATAATTCGTATCAGGGAAAGCGAGAATTCTCCAATGAGGTGACTCTTCTTTCAAGAATACATCACAGAAACTTAGTACAGCTTCTTGGGTACTGTCGAGAAGAAGGGAGCAGCATGCTCATTTATGAGTTCATGCATAATGGAACTCTTAAGGAACATCTTTATGGTCCGCTGACACATGGCCGTAGTATCAATTGGATTAAGCGCCTTGAAATTGCGGAAGACTCTGCCAAAGGGATTGAATATCTACACACAGGTTGCGTTCCTGCTGTTATTCATAGAGACTTAAAAAGCAGCAATATTCTTCTTGACAGACAAATGAGAGCCAAGGTTTCAGATTTTGGTCTTTCAAAACTCGCTGTTGATGGAGTTTCCCATGTTTCGAGCATAGTTCGGGGCACAGTAGGGTATCTAGATCCAGAGTACTATATTTCCCAGCAGCTGACCGACAAGAGTGATGTTTATAGTTTTGGCGTCATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCAAATGAAAGTTTTGGTGCTAATTGCAGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATTATCGATCCCTCTCTGCGAAGTGACTATGACCTACAATCGATGTGGAAAATAGCAGAGAAAGCATTGATGTGCGTTCAACCTCACGGCCATATGCGGCCGTCGATTTCGGAAGTTCTGAAGGAGATCCAAGATGCAATCTCTATAGAGAGAGCGACTGAAACAATAAGGGAAGGCAATTCAGATGAGATGTCGAGACAGTCTATTCATTCTTCCATGAACATGGGATCAATGGATCTGGGTGGAACTGAGAATTATTTGTCTATTGATGAATCCATTTCACAGCCCACTGCAAGATAG 2715 0.407 MESRLLLIFSLPYILLLLSCLSSAQKPGFVSLDCGGKEKFSDELGLDWSPDDKLTYGETSTISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRASFLYGNFDNNNVYPKFDLSFGATHWCTIVISDANTIEMRELIFLATSSKVNVCLSNATTGQPFISTLELRQFNGSVYYTQFEEQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAVGTEKISTNLPVDVNSDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFTYFAEIEDLGPEESRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFTNLSLPFVLSFRFGKTSDSSRGPLVNALEINKYLEKNDGSVDGAAISEVISHYSADWAQEGGDPCLPVPWSWVHCSSDPQPRLVSILLSSKNLTGNVPLDITKLTGLVELWLDGNMLTGSIPDFTGCMDLKIIHLENNRLTGEIPSSLANLPNLRELYVQNNMLSGTVPSGLQSKDLVLNYSGNINLHKGSSKKSHMFVIIGSSIGAAVLLIATIASCLLASSKNDAPAEVAHCFSFSEIENATNNFEKKIGAGGFGVVYYGVLKDGKEIAVKVLINNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEGSSMLIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRQMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGANCRNIVQWAKLHIESGDIQGIIDPSLRSDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIERATETIREGNSDEMSRQSIHSSMNMGSMDLGGTENYLSIDESISQPTAR 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0859 904 Gene3D Ribonuclease Inhibitor 375 528 IPR032675 -
Sto8g0859 904 Pfam Protein tyrosine and serine/threonine kinase 578 844 IPR001245 GO:0004672|GO:0006468
Sto8g0859 904 CDD STKc_IRAK 582 849 - -
Sto8g0859 904 PANTHER OS07G0107800 PROTEIN-RELATED 555 904 - -
Sto8g0859 904 PANTHER OS07G0107800 PROTEIN-RELATED 20 552 - -
Sto8g0859 904 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Sto8g0859 904 Gene3D Transferase(Phosphotransferase) domain 1 652 874 - -
Sto8g0859 904 Pfam Malectin-like domain 32 362 IPR024788 -
Sto8g0859 904 Gene3D Phosphorylase Kinase; domain 1 560 651 - -
Sto8g0859 904 ProSiteProfiles Protein kinase domain profile. 576 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0859 904 SMART serkin_6 576 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0859 904 SUPERFAMILY L domain-like 399 505 - -
Sto8g0859 904 SUPERFAMILY Protein kinase-like (PK-like) 563 847 IPR011009 -
Sto8g0859 904 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Sto8g0859 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Sto8g0859 904 PANTHER TYROSINE KINASE DOMAIN PROTEIN 555 904 - -
Sto8g0859 904 PANTHER TYROSINE KINASE DOMAIN PROTEIN 20 552 - -
Sto8g0859 904 Pfam Leucine Rich Repeat 461 482 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0859 Sto-Chr8 5447928 5453561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0859 22 686 Receptor kinase-like Gene Family AT2G37050 68.489 0.0 998
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto8g0859 Malectin_like 6.7e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0859 - - gmx:100784017 1580.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0859 8 5447928 5453561 Sto13g3267 13 36412546 36424135 CCT