Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0851 ATGCCGCCTAAGCAGCAATCGAAAGCTGATATAGCGAAGAAGCAGAAGATCGTTGAAGATAAAACCTTCGGTCTCAAAAACAAGAACAAGAGCAAAAATGTCCAGAAATACGTTCAGAACCTTAAGCAATCTGTACAGCCCAAGCCCGATGCTTCCAAAGTCGCTGCCAAGaaaaagaaggaggaagaaaaGGCCAAGGAGAAGGAGCTAAATGATTTGTTTAAAATCGCTGTTACCCAGCCTAAAGTACCAGTTGGTGTTGATCCCAAGTCCATAGTATGTGAGTTTTTTAAAGCGGGACAGTGTACCAAGGGGTTTAAATGCAAGTTCTCACATGATTTGAATGTTCAGAGGAAAGGGGAAAAGATTGACATTTACAGTGACAAGCGCGACGAGGAAACGATGGAGGATTGGGATCAAGAGACTTTAGAGAAGGTGGTGGAGTCAAAGAAAACCGAGTATAATCAGAACAAACCAACTGACATTGTCTGTAAATACTTTTTGGACGCGGTGGAGAAGAAGCAATATGGCTGGTTTTGGGTTTGCCCTAATGGTGGTAAGAACTGCCATTATAGACATGCCCTTCCCCCTGGATATGTTTTAAAATCTCAAATGAAAGCTCTGTTAGAGGAAGAGGCTGAAAAATTATCAATTGAAGAGGAGATTGAAAACCAGCGCGCGAAAGTGAAAACTATAACTCCTATGACTCCTGAGTTATTCATGgaatggaggaagaagaagattgcAGAAAGAGATGCCAATTTGGCTGAACAACAGGCAGAGAGAGCTAAGAATGATCGTATGAGTGGCCGTGAGCTATTTTTGTCAGATGCTAGCTTGTTTGTGGATGATGCTGAGGCATATGACAAGTACCAAAGAGAACCAGAATCTGACCATACTGAACAGAAGGAGAATGGGAATGCTAATGAAGATGGTCCCAGCACCTCAACAACAGGTGGTGGCAACACTGATGCGGATGCTGATACTGATGCTGATGCTGAAGttcctgatgatgatgatgatgatgatgatgatgaactaGACTTGGATGAACTGAATGAATTGGAAGCAAGTTTATTGAAGACATCAATCCAAATAAAGGAGCCAGGAGCCGAAGCTTAA 1122 0.3984 MPPKQQSKADIAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQSVQPKPDASKVAAKKKKEEEKAKEKELNDLFKIAVTQPKVPVGVDPKSIVCEFFKAGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDEETMEDWDQETLEKVVESKKTEYNQNKPTDIVCKYFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEEAEKLSIEEEIENQRAKVKTITPMTPELFMEWRKKKIAERDANLAEQQAERAKNDRMSGRELFLSDASLFVDDAEAYDKYQREPESDHTEQKENGNANEDGPSTSTTGGGNTDADADTDADAEVPDDDDDDDDDELDLDELNELEASLLKTSIQIKEPGAEA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0851 373 Coils Coil 246 266 - -
Sto8g0851 373 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 21 1 372 - -
Sto8g0851 373 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 372 - -
Sto8g0851 373 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Sto8g0851 373 MobiDBLite consensus disorder prediction 307 324 - -
Sto8g0851 373 MobiDBLite consensus disorder prediction 291 306 - -
Sto8g0851 373 Coils Coil 201 228 - -
Sto8g0851 373 Pfam DRG Family Regulatory Proteins, Tma46 215 301 IPR032378 -
Sto8g0851 373 Coils Coil 51 73 - -
Sto8g0851 373 Gene3D - 87 204 - -
Sto8g0851 373 MobiDBLite consensus disorder prediction 327 351 - -
Sto8g0851 373 MobiDBLite consensus disorder prediction 291 351 - -
Sto8g0851 373 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Sto8g0851 373 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Sto8g0851 373 MobiDBLite consensus disorder prediction 40 63 - -
Sto8g0851 373 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Sto8g0851 373 Gene3D - 205 279 - -
Sto8g0851 373 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sto8g0851 DFRP_C 5.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0851 - - gmx:100806617 579.711