Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0847 ATGACGAGGGGTGTGCTGATGACTGTCAGTGGTGATgataaagaattagaaaaatCGACTCAGCATCTACAAGTTGTGAACGAAACCTTTAAAGATGGAGTTAGTGGTGAGGAACACGGGTTACATGAGGATGATGAGTTGAAAGTCAATGGAATAGCTGAAGAAGTTAAGGTTGGACAAGGGGCAACAGTGGAAGGCCCTGCTGTCCAGCATATACCACAGCAACAACCGCAAGGGGCAATTGTTTGTTGGGAGAGGTTTCTGCATATTAGATCCCTTAGGGTTTTGCTTGTGGAGAATGATGACTGTACTCGCCAGATTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAACAGCAAATGGATTGCAAGCATGGAAGATGTTGGAGGAtttaaccaatcatattgatctcGTTTTAACTGAGGTAGCAATGCCTTTCCTATCAGGCACTGGTCTTCTATGCAAGATTATGCGCCATAAAACGCGGAAAAATCTTCCAGTAATTATGATGTCATCTCATGACTCTATGGCTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTAAAACCCATAAGGAAGAACGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAGATGCCATAGTtcTAGTGGGAGCGGGAGTGAAAGTGGCACACAAACTCAGAAGTCTGTACAATCAAAGAGACTCGAGAAATCTGATAACAACATTGGCAGCAATGATGAGGACAACAATGGAAGTGTAGGCCTAAGTATTAGGAATGGGAGTGACAATGGTAGTGGCACTCAGAGCTCCTGGACCAAACAAGTCGTAGAAGCTGACAGTCCCAAAAAAGTGCCCCAGTGGGATCAAATAGCTAAGTATTCTGATAGCACCTACGCTCAAGTCATTCACTCCAACACTGAAATATGTGGTAACAAGATGGTTCCTACAGCCACAAATTTTTGTCCAGAACAGAAGGAACAACATGTCGCAGAGCTGAAAGTTGACTCAAGTAGAGAACTTGAACTAAGTCTCGACTATAGAAATGAGGTTCCAGTCAAAACTGCTGATGCAGAACATAATATCCCACTTGATATAGGCTCCTCTAAATTCACTGAGCAGATTGGTAGTGGACGGCTGAATCTTAATTGTGAGAATCCATTAAACAAACCAAGGGTCAAAGGTCCTTTAGTGTCTGATGCCACCAATGGCTCCTCTGATTCTCAGATGCATGATGGAGAATTTGAAGCCCCATATGAAAGATCCAAGCCCTCAGGTATTGACAATAAAACTACTAACACTATTGAAGAATTGCCAGCTCTTGAGCTCAGTTTAAAGAGGCTTAGAGGGGTTAAAGATGCTGGAATTACAATTCAGAATGAACGGAATGTTATAAGATGTTCAGACCTTTCATCATTCTCAAGGTTCAATGCAAGTTCTAACACTAAGAGTTCTCCCATTGGATGTATTGGAACTGAAAGCAACTCTCCTCATGATAAAACCTTAGAAGTCACAAACAGAGATTCACCACGAGAAATTCAATCTCATTCTAGTGGCAATCCTCCTCCTGGGAACTCAAATGGTGTGAGTAATAACATTGATATGGGTTCCACTACAAATAAAGATTTTACTAAAACTGCAGTTATAAGTGAGCCAGTGGTAACATCAACAGCCAAACATTTGTACCAATCATCTGCTTTACAGTCCAAAATGAGCAACCTTATATGTACCTCTCAACAAGTTATATTACGAAAAAAAGAAGATATGACTGCTACAACAATGATAGAACCAAGAGGAGACACACATAAGGTCTCTCCAACTCAGGACTTCCATCACCATTTTGAAAACCATAACAGTATTGCTATTGACATGCAGCACCAGCTGCCACCTGATCATGAGGATTCAACTTTAAAGGAAATGGCTGCTGCTGCACCACATTGTGGATCATCAAATGCAGTGGAACTGCTGGTTGAAGGTAATATTGGAAATTACAGTGTCAATAGAAGTGCATCAGGCAGCAACAATGGAAGCAATGGTCAAAATGGGAGCAGTACTGCAGTTAATGCCATAGAGACAAACATAGAAAGTGACAATGGAATTGCAAGAAATAGTGGAAGTGGTGATGCTAGTGGGAGTAGGAATGGAAGCGGGAAAGAGAGTGCCAACAGAGTAGATCAAAACGAGACTTCTAAAGGAGAAGCAGCCTTAACTATATTTCACCAAAAGAGAAAGGAGAGTTGCTTCCGGCAAAAGATTCAGACTTACCTGGAACTAGTGAACTGTATTCTATGCTCTGCTGCATctctgaattttaaaatagCTGGAGTAACTTCCGTGATGATTATTAGGAGAGTAtggAACATGCAAAAGAAATCATGGAAAATGAAGGATGCAATCACTTGTTACACTTGA 2418 0.4049 MTRGVLMTVSGDDKELEKSTQHLQVVNETFKDGVSGEEHGLHEDDELKVNGIAEEVKVGQGATVEGPAVQHIPQQQPQGAIVCWERFLHIRSLRVLLVENDDCTRQIVTALLRNCSYEVIETANGLQAWKMLEDLTNHIDLVLTEVAMPFLSGTGLLCKIMRHKTRKNLPVIMMSSHDSMALVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVQSKRLEKSDNNIGSNDEDNNGSVGLSIRNGSDNGSGTQSSWTKQVVEADSPKKVPQWDQIAKYSDSTYAQVIHSNTEICGNKMVPTATNFCPEQKEQHVAELKVDSSRELELSLDYRNEVPVKTADAEHNIPLDIGSSKFTEQIGSGRLNLNCENPLNKPRVKGPLVSDATNGSSDSQMHDGEFEAPYERSKPSGIDNKTTNTIEELPALELSLKRLRGVKDAGITIQNERNVIRCSDLSSFSRFNASSNTKSSPIGCIGTESNSPHDKTLEVTNRDSPREIQSHSSGNPPPGNSNGVSNNIDMGSTTNKDFTKTAVISEPVVTSTAKHLYQSSALQSKMSNLICTSQQVILRKKEDMTATTMIEPRGDTHKVSPTQDFHHHFENHNSIAIDMQHQLPPDHEDSTLKEMAAAAPHCGSSNAVELLVEGNIGNYSVNRSASGSNNGSNGQNGSSTAVNAIETNIESDNGIARNSGSGDASGSRNGSGKESANRVDQNETSKGEAALTIFHQKRKESCFRQKIQTYLELVNCILCSAASLNFKIAGVTSVMIIRRVWNMQKKSWKMKDAITCYT 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0847 805 Gene3D - 92 256 - -
Sto8g0847 805 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 764 IPR045279 GO:0009736
Sto8g0847 805 MobiDBLite consensus disorder prediction 247 279 - -
Sto8g0847 805 MobiDBLite consensus disorder prediction 217 287 - -
Sto8g0847 805 MobiDBLite consensus disorder prediction 479 501 - -
Sto8g0847 805 MobiDBLite consensus disorder prediction 394 433 - -
Sto8g0847 805 MobiDBLite consensus disorder prediction 513 541 - -
Sto8g0847 805 ProSiteProfiles Response regulatory domain profile. 94 212 IPR001789 GO:0000160
Sto8g0847 805 SMART REC_2 93 208 IPR001789 GO:0000160
Sto8g0847 805 MobiDBLite consensus disorder prediction 479 541 - -
Sto8g0847 805 Pfam Response regulator receiver domain 95 206 IPR001789 GO:0000160
Sto8g0847 805 MobiDBLite consensus disorder prediction 217 234 - -
Sto8g0847 805 MobiDBLite consensus disorder prediction 698 731 - -
Sto8g0847 805 SUPERFAMILY CheY-like 91 218 IPR011006 -
Sto8g0847 805 CDD psREC_PRR 95 198 - -
Sto8g0847 805 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 33 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0847 Sto-Chr8 5359463 5364362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0847 77 479 Response Regulator Gene Family AT5G60100 45.700 9.07e-84 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto8g0847 Response_reg 5.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0847 K12129 - gmx:100796933 919.072