Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0846 ATGGATGTTAAGGAAGCAGAAAGGGTAGTTGTTGCAAAGCCAGTAGCTTCAAGGCCTTCTTGTCCCTCTTTTAGATCCTTCTCAGAGCTTCTTGCTGGTGCCATCAATGTCTCTCCCTCTATTGAACCTTCTCAAACCACAGTTTCAGCCATTAGGCCTAGGACTGTGAGGTTCAAGCCACCCATGACTCGCCCACCAACTACTTCTGGATTTGTTTCTTCTGAGGCTAACCCATCTTATAAAAGTTATAAACCAGAAGAGACTAATCATAATCAATCTGTGGTTTACAAGCCAATGGCTAAGCTTGTCTCAAAGGCCACTGTTTCTGTTCTGGCAAATATGGGAAATTTTAGTACTACTAGTCACCAGCAATTTCAACATCCAAATCAAGTGGAGAAACTCAGACCAACCAATTTGATCacaaatcatcatcatcagaatCATCAAGCAACAAGTGAAAGTCTGAAGATGGCAGCACCAGTACAGATAATAGAGGATGAGCAGAAAACTTCACCATCcacaagtaataataataataatggtggATCAGATAGACCTTGTTATGATGGTTATAACTGGAGGAAGTATGGGCAGAAGCAAGTGAAAGGAAGTGAGTACCCAAGGAGTTATTACAAATGCACACATCCCAATTGTCCAGTGAAGAAGAAGGTTGAGAGATCATTTGATGGGCAGATTGCAGAGATTGTGTACAAAGGAGAACACAATCATTCAAAGCCTCAGCCTCCTAAGAGGAACTCATCTTCAGGAATGGCGTGTGATGGATTAGTATTGGGTGGTCAAGATGGTAACAACCCTTTATGGAGTGGTAGTGCTCCTCATCATCACAATGGAGATCAGAGGAATGAAGGCAGAATAATGGAGAACCAGAATAATGAGAGAGGAGGTTTTCATGAGAACTCATGTGGTCAAAGTGGGGAATGTGAAGAAGGAAGCAAGGTGTTTGAAGCTGATCATCAGGAAGATGAACccagaagaaaaagaagGAAAAATATTGAGAAGCAAAATTGCAatgaaggaggagaagaagggatAGTAGAAGGTGGTGAAGTGGTGGTTCAAAGTTGTACAGATTCTGAAATAGTTGGAGATGGGTTCCGGTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATTTCCCAGGAGTTATTATAGATGTACTAACATAAAGTGCAGTGCTCGGAAACATGTGGAAAGATCAATAGACGATCCAAGAGCATTCATCACAACCTATGAGGGAAAACACAACCATGACATGCCACGCAAAACCACTCCTCCTAATAATCCTATTCCTATGCTCTCTCACAAACATCCCACCAAAACCCCTCATTAA 1356 0.3982 MDVKEAERVVVAKPVASRPSCPSFRSFSELLAGAINVSPSIEPSQTTVSAIRPRTVRFKPPMTRPPTTSGFVSSEANPSYKSYKPEETNHNQSVVYKPMAKLVSKATVSVLANMGNFSTTSHQQFQHPNQVEKLRPTNLITNHHHQNHQATSESLKMAAPVQIIEDEQKTSPSTSNNNNNGGSDRPCYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQPPKRNSSSGMACDGLVLGGQDGNNPLWSGSAPHHHNGDQRNEGRIMENQNNERGGFHENSCGQSGECEEGSKVFEADHQEDEPRRKRRKNIEKQNCNEGGEEGIVEGGEVVVQSCTDSEIVGDGFRWRKYGQKVVKGNPFPRSYYRCTNIKCSARKHVERSIDDPRAFITTYEGKHNHDMPRKTTPPNNPIPMLSHKHPTKTPH 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0846 451 MobiDBLite consensus disorder prediction 60 86 - -
Sto8g0846 451 SUPERFAMILY WRKY DNA-binding domain 186 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0846 451 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 431 IPR044810 GO:0003700
Sto8g0846 451 SUPERFAMILY WRKY DNA-binding domain 361 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0846 451 MobiDBLite consensus disorder prediction 419 451 - -
Sto8g0846 451 MobiDBLite consensus disorder prediction 66 86 - -
Sto8g0846 451 ProSiteProfiles WRKY domain profile. 363 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0846 451 MobiDBLite consensus disorder prediction 317 340 - -
Sto8g0846 451 Gene3D WRKY domain 353 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0846 451 Gene3D WRKY domain 174 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0846 451 ProSiteProfiles WRKY domain profile. 189 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0846 451 MobiDBLite consensus disorder prediction 238 340 - -
Sto8g0846 451 MobiDBLite consensus disorder prediction 168 185 - -
Sto8g0846 451 MobiDBLite consensus disorder prediction 168 190 - -
Sto8g0846 451 SMART WRKY_cls 187 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0846 451 SMART WRKY_cls 368 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0846 451 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 17 431 - -
Sto8g0846 451 Pfam WRKY DNA -binding domain 189 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0846 451 Pfam WRKY DNA -binding domain 370 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0846 Sto-Chr8 5349517 5351569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0846 86 442 WRKY Transcription Factor Family AT2G37260 44.301 5.41e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto8g0846 WRKY 6.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0846 - - qsu:112005308 476.863