Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0844 ATGGCTTCTTCGGCTTTGCAAGAACCTCTGCCTCCTTCGTTGACTTCCGCCTCCCCACCACCACCTCTTTTCGACGGAACCACCAGATTGTACATCAACTATGGCTGCCCTTTTGCGCAACGTGTGTGGATCACTAGGAACtacaagGGACTACAAGACAAGATCAAATTGGTTTCTATCGATCTCCAAGATAGGCCTGCTTGGTATAAGGAGAAAGTGTACCCTGAAAATAAGGTGCCATCGCTGGAGCACAATGGGAAGGTTTTGGGGGAAAGTCTTGATTTAGTCAAATATGTAGATTTAAACTTTGAAGGACCATCCTTGTTTCCCGGTGATGATCCTGTTAAGAGAGAGTTTGGTGAGCAGGTGATATCCCATGTTGATACATTCGTCAAAGACATGTTCTCTTCAATGAGAGGAGAAGATCGCATACAACAAATCAGTTCTACTTTTGATTACTTGGAGAATGCTCTTGGGAAATTCGATGATGGACCATTCTTGCTTGGCCAATTTAGTGCTGTGGATATTGTGTATATTCCATTTGTTGAAAGAGTCCAGATCGTCTTGTCTGAGATATTCAAGCATGATTTCAGCGCAGGAAAGCCTAAACTTGCAGCGTGGTTTGAGGAGCTGAACAAGATTGGTGCTTATACTCAGACAAAAATAGATCCCAAGCATCACGTTGAAGTTTTCAAGAAACGTGTTTTGCTATGGGCAGTAGGACTGCAACTGCTCTTAAAGTATGTTGTTGTCCTTACTGAGGATTCCTATGGATTTGCATTGAGACCTCAATATGCACAATCATACAGACAGTATGCTTCTATCTACAAGGAGGAGGAAGCTGAAAGAGCAGATAAATGGAGAGGCTTCCTGGATCAGGTAGTCAAATCATCTCAACCATGTTCTTCTCAGAATGAAGATAAAGAAATATCAAAGGCTGAAGGTAGTGAGATAAAAGAAGAGACCAATTCAAGGAGGGTAAGTGAAGGAAATGATTTGAGTGTCAGGAAGTCTTGCGAAGGTACTGATGTAGAAGAAGAAGCAGGTGCTGATAGAGTGAGTGAAGGAAGTGACTTGAGTAGCAGGAAATCTGCTGAAGTTGCTGAGATAAAGGAAGAGACAAGTCCAGGGAAGCTCAGAGAAGGAGACAATTCAAGTGTCAGGAAGTCTGCTGAAGGTTCTGAGATAAAAGAAGAGACAAGAGCTGAGAGGATTAGTGAAGATAATGATTCAAGTGTTAGGAAGTTTTGTGAAGGTACTGAGGTAGAAGAAGAGGCAGGTGCTGATAGAGCAAGTGAAGGAAATGACTCGAGTGGCAGGATATCTGTTGAAGGTGCTGAGATAAAGGAAGAGACAAGTCCAGGGAAGCTTAGAGAAGGAGACAATTCAAGTGTCAGGAAGCCTTCTGAAGGTTCTGAGATAAAAGAAGAGACGAGCGCAGAGAGGGTTAATGAAGGTAATGATTTGAGTGTCAGGAAGTCTTGTGAAGGTACTGAGGTTGAAGGCTCAGGTGCTGACAGAATAAGCGAAGGAAATGACTTGAGTGGCAGGAAATCAGCTGAAGGTGCTGAGATAAAGGAAGAGACTTGTCCAGAGAAGCTTAGAGAAGGAGACAATTCAAGTACCAGGAAGCCTGCCGAAGGTTCTGAGGTAAAGGAAGAGACAAGTGCAGAGAAGGTTAGTGAAGGTAATGATTCAAGTATCAGGAAGCCTTTTTCTCATGATTCAACAACAACAAGCAGTTCAGAAAAGGAGGTACACTATCCAGAAGAAAGAAAGGCCCGTAAGGTTCAAACCTGGGGTGAAATTAGACCTTCTCTTACTGCCATTGAAAAATTGATGAGTAATCGTGTCAAGAAGGCAAAGAAAATTAATGGTGAGCTGACAAATGGTATATACGACCATCTTCCATCTATAGAAAAATCTGAACCTCTAGAAGGAGTTTCTGAGTCTCCATTGAAAGTGCTGGAGTCCCTTGTTCAAGGAGGAGTGCCAAAGGATCTTAGAGGAGAGGTTTGGCAAGCTTTTCTAGGTGTGAAGACACGTCGGGTGGAGAGATATTATGAGGATCTGGTGGCGCAAGAAAGTAACAGTAGTGAAAGCATGGAGCTAGATGTCTCACCCGGTTCATTTAGGCAGTGGAGAAAGCAGATTGAGAAGGACATACCACGAACTTTCCCAGGTCATCCTGCTTTGGATGAAAATGGCAGGAATTCCTTGAGGCGTTTGCTCCTAGCATATGCTCGACATAATCCATCTGTTGGTTATTGCCAGGCAATGAACTTCTTTGCTGGTTTATTGTTGCTTCTTATGCCAGAAGAAAATGCCTTTTGGGCATTGGTGGGCATTATTGATGATTATTTTGAAGGTTATTTTACAGAGGAAATGGTAGAATCGCAGGTGGACCAGCTTGTCTTTGAGCAATTAATGCGGGAAAGATTTCCCAAACTGGTTAATCATCTGGATTACTTGGGAGTGCAGGTGGCTTGGATTTCTGGACCTTGGTTCCTATCAATCTTTGTAAACATGATTCCTTGGGAAAGTGTTCTTCGTGTCTGGGATGTGTTGCTATTTGAAGGGAACCGTGTAATGCTATTTCGAACAGCCCTTGCTCTAATGGAGTTATATGGTCCTGCGTTAGTTACAACAAAAGATGCAGGTGATGCAATCACTCTATTGCAATCACTTGCTGGCTCAACATTTGACAGCAGCCAGCTTATCTTCACTGCTTGCGTAAGTTTCCTAGCTGTGACTGAGACCAGATTGCAGGAACTGAGAGAAAAACATCGGCCATCTGTACTAGTTGTTGTGGATGAAAGATCTAAAATGGGGAGAGTTTGGAAGGATTCCAAAGGGCTTGCATCTAAACTGTACAGTTTCAAGCATAGCCGAGGATCACTGGTAGAAGAAAGCAAAACCTCTGAAGGAGATGATATGGTAACTGATGCGGACAAAATGCGCTTGGAATCCCATTCCTCTAATTTAGATGAATTGCTTAATAGCCTCAATGCTGATTCAGAAGTGGATTCTCTACCAGATCTCCAGGAACAGGTGGATTGGTTGAAGGTTGAGTTATGCAGAATACTAGAGGAGAAAAGATCTGCTATACTCCGAGCTGAGGAGCTTGAAACAGCTCTTATGGAGATGGTCACAGAAGACAATCGACGGGAACTGAGTGCGAGGGTTGAGCAATTGGAGCAGGAGGTTGCTGAGCTACAGCAAGCACTTGCTGATAAAAAGTTACAAGAAGCTGCCATGCTGGAGGTCCTAATGCGGGTAGAGCTGGAGCAAAAAGTTACTGAAGATGCTCGCAGAAGAGCTGAGCAAGATCTTGCTGCTCAGAAATATGTAGTTCATTTGCTTCAGgaaaagtatgataaagCCATGGCATCAATCAATGAGATGGAAAAGCGAGCGGTTATGGCAGAAAGTATGTTAGAGGCCACCCTTCAATATGAATCTGGTCAATCCAAAGCACTTTCTTCTCCAAGGTTGTACCCTAAACATCCAATGAAACAGGGCAAAACTACAAATGGTGCGGAATGTAGCGAAAGTCAGTCTAACAACCATGGAAGAGGAGACCCTGCCACTCCCAGTAGGGAATCCAATAACTAA 3615 0.4326 MASSALQEPLPPSLTSASPPPPLFDGTTRLYINYGCPFAQRVWITRNYKGLQDKIKLVSIDLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYVDLNFEGPSLFPGDDPVKREFGEQVISHVDTFVKDMFSSMRGEDRIQQISSTFDYLENALGKFDDGPFLLGQFSAVDIVYIPFVERVQIVLSEIFKHDFSAGKPKLAAWFEELNKIGAYTQTKIDPKHHVEVFKKRVLLWAVGLQLLLKYVVVLTEDSYGFALRPQYAQSYRQYASIYKEEEAERADKWRGFLDQVVKSSQPCSSQNEDKEISKAEGSEIKEETNSRRVSEGNDLSVRKSCEGTDVEEEAGADRVSEGSDLSSRKSAEVAEIKEETSPGKLREGDNSSVRKSAEGSEIKEETRAERISEDNDSSVRKFCEGTEVEEEAGADRASEGNDSSGRISVEGAEIKEETSPGKLREGDNSSVRKPSEGSEIKEETSAERVNEGNDLSVRKSCEGTEVEGSGADRISEGNDLSGRKSAEGAEIKEETCPEKLREGDNSSTRKPAEGSEVKEETSAEKVSEGNDSSIRKPFSHDSTTTSSSEKEVHYPEERKARKVQTWGEIRPSLTAIEKLMSNRVKKAKKINGELTNGIYDHLPSIEKSEPLEGVSESPLKVLESLVQGGVPKDLRGEVWQAFLGVKTRRVERYYEDLVAQESNSSESMELDVSPGSFRQWRKQIEKDIPRTFPGHPALDENGRNSLRRLLLAYARHNPSVGYCQAMNFFAGLLLLLMPEENAFWALVGIIDDYFEGYFTEEMVESQVDQLVFEQLMRERFPKLVNHLDYLGVQVAWISGPWFLSIFVNMIPWESVLRVWDVLLFEGNRVMLFRTALALMELYGPALVTTKDAGDAITLLQSLAGSTFDSSQLIFTACVSFLAVTETRLQELREKHRPSVLVVVDERSKMGRVWKDSKGLASKLYSFKHSRGSLVEESKTSEGDDMVTDADKMRLESHSSNLDELLNSLNADSEVDSLPDLQEQVDWLKVELCRILEEKRSAILRAEELETALMEMVTEDNRRELSARVEQLEQEVAELQQALADKKLQEAAMLEVLMRVELEQKVTEDARRRAEQDLAAQKYVVHLLQEKYDKAMASINEMEKRAVMAESMLEATLQYESGQSKALSSPRLYPKHPMKQGKTTNGAECSESQSNNHGRGDPATPSRESNN 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0844 1204 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Sto8g0844 1204 MobiDBLite consensus disorder prediction 298 593 - -
Sto8g0844 1204 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 680 790 - -
Sto8g0844 1204 Coils Coil 1118 1138 - -
Sto8g0844 1204 Pfam Glutathione S-transferase, C-terminal domain 143 209 - -
Sto8g0844 1204 SMART tbc_4 660 884 IPR000195 -
Sto8g0844 1204 MobiDBLite consensus disorder prediction 443 495 - -
Sto8g0844 1204 CDD GST_C_Lambda 113 232 - -
Sto8g0844 1204 MobiDBLite consensus disorder prediction 1 21 - -
Sto8g0844 1204 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 244 1159 - -
Sto8g0844 1204 SUPERFAMILY Thioredoxin-like 17 107 IPR036249 -
Sto8g0844 1204 Gene3D Glutaredoxin 1 104 - -
Sto8g0844 1204 Gene3D - 791 931 - -
Sto8g0844 1204 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 244 1159 - -
Sto8g0844 1204 SUPERFAMILY GST C-terminal domain-like 103 234 IPR036282 -
Sto8g0844 1204 Gene3D - 105 238 - -
Sto8g0844 1204 Gene3D - 645 678 - -
Sto8g0844 1204 MobiDBLite consensus disorder prediction 1158 1204 - -
Sto8g0844 1204 Coils Coil 1048 1085 - -
Sto8g0844 1204 MobiDBLite consensus disorder prediction 307 431 - -
Sto8g0844 1204 MobiDBLite consensus disorder prediction 1176 1204 - -
Sto8g0844 1204 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 647 820 IPR035969 -
Sto8g0844 1204 Pfam Rab-GTPase-TBC domain 667 878 IPR000195 -
Sto8g0844 1204 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 800 912 IPR035969 -
Sto8g0844 1204 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Sto8g0844 1204 MobiDBLite consensus disorder prediction 511 569 - -
Sto8g0844 1204 SFLD Glutathione Transferase (cytosolic) 29 211 IPR040079 -
Sto8g0844 1204 ProSiteProfiles TBC/rab GAP domain profile. 663 860 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0844 Sto-Chr8 5331260 5342396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0844 11 236 Glutathione S-transferase Gene Family AT5G02790 65.487 5.26e-101 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0844 - - cam:101511652 973.77