Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto8g0841 | TTGTTGTCGATTTCTTCCATTCCTATTGGCGCGGCGGCGTGTACTGCCACCACTTTGATTCCTTACGTTGAGATGGTGGTCCGGTGCCGGAGACTCGTCGGTGTAATGGGTTGCGTGAGCGGCGGAGGAAAAGGTGTTGGGGAAGTGGCGGCGTCGAGGGCGGCGGTGGTGGCGCTGCCGGCGGTGGAAGTGGAAGCGGGTGGAAGAGAATGTGTGATATGCAAGGAGGAGATGGGGATAGGGAGGGACGTGTGCGAGCTGCCATGTCAGCATTTGTTTCATTGGAAGTGTATATTACCGTGGCTGAAGAAGAGGAACACGTGTCCTTGCTGCAGGTTCCATCTGCCGTCGGATAATGTGCTGGGAGAGATCCAACGGCTGTGGGAGGTGTTGGTGTGA | 399 | 0.5689 | LLSISSIPIGAAACTATTLIPYVEMVVRCRRLVGVMGCVSGGGKGVGEVAASRAAVVALPAVEVEAGGRECVICKEEMGIGRDVCELPCQHLFHWKCILPWLKKRNTCPCCRFHLPSDNVLGEIQRLWEVLV | 132 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto8g0841 | 132 | ProSiteProfiles | Zinc finger RING-type profile. | 71 | 112 | IPR001841 | - | |
Sto8g0841 | 132 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 44 | 118 | IPR013083 | - | |
Sto8g0841 | 132 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 14 | 132 | - | - | |
Sto8g0841 | 132 | SUPERFAMILY | RING/U-box | 66 | 117 | - | - | |
Sto8g0841 | 132 | SMART | ring_2 | 71 | 111 | IPR001841 | - | |
Sto8g0841 | 132 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC | 14 | 132 | - | - | |
Sto8g0841 | 132 | Pfam | Ring finger domain | 70 | 112 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto8g0841 | Sto-Chr8 | 5311734 | 5312132 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto8g0841 | 10 | 132 | C3H Transcription Factor Family | AT5G02750 | 51.128 | 9.95e-44 | 143 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto8g0841 | - | - | pvu:PHAVU_007G161400g | 181.03 |