Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0820 ATGTCAGTGACGCCTGATCAATCTAAGAAGGTGGGATTGGGGATGACAGCATCTCCATCTCCCTTTCTCACACCACGCCCGGAACGGCGTCGCACTGATTCAAGAGGGCCTGACTTCAACTCAAATCGTCTGGACAAGGATAAAGAGACTAACGTCCAAGTTCTGCTTAGATGCAGGCCATTAAGCGAGGATGAACAAAAGTTGAACGTTCCCAACGTGGTGTCATGTAATGAGCATAAAAGAGAAGTCACCGTAGCTAGCAAGCAAGTAGATAGAATTTTTGCCTTTGACAAGGTTTTTGGACCTAAAGCACAGCAGAGAGCAATATATGACCAAGCCATTGCCCCAATTGTTAATGAAGTTCTTGATGGTTACAACTGCACTATCTTTGCATATGGCCAAACAGGCACTGGTAAAACTTATACAATGGAGGGTGGGATGAGGAATAAGGGTGGAGATTTACCTGCTGAGGCTGGTGTTATTCCAAGAGCAGTTCGCCAAATTTTCGATATGTTGGAGGCACAAAACGCGGACTATAGCATGAAAGTGACATTTCTTGAGCTTTATAATGAAGACATAACAGATTTATTGGCCCCAGAAGACAATTCTAGTTCTAGGTCTGTAGAAGAAAAGCAAAAGAAACCTCTATCCCTTATGGAAGATGGAAAGGGTTGTGTGGTTGTGAGAGGGCTTGAAGAAGAATCCGTGTATGGTGTAAATGAGATTTATGCTTTGCTTGAACGTGGGGCATCTAAGAGGCGCACAGCAGAAACATTGCTTAACAAGCGTAGCAGCCGCTCGCATTCAGTCTTAACAATTACCATCTATGTCAAAGAAGCAGTCATTGGTGGTGAAGAGTTGATTAAATGTGGGAAGCTTAATCTTGTTGATTTGGCAGGATCAGAAAATATATTGCGTTCAGGAGCACGTGAGGGTCGTGCTAGAGAAGCAGGAGAGATAAACAAGAGTTTGCTCACCCTAGGACGTGTCATAAATGCACTTGTGGAACATTCTCCTCATATACCTTACAGAGATAGTAAGCTTACAAGGATTTTACGAGACTCCTTGGGAGGGAAAACGAAAACATGCATAATTGCTACTATTTCACCATCTGCTTATTGTTTGGAAGAAACACTAAGTACACTGGATTATGCTAGTCGTGCCAAAAACATAAAGAATAAGCCTGAGGCAAACCAAAAAGTTTCAAAGGCTGTTTTGCTGAAGGACTTGTATATGGAAATTGAGAGAATGAAAGAAGATGTTCGAGCAGCAAGGGAAAAGAATGGTGTATATGTTCCTCATGAGAGATTTGCCAGGGAAGAAGCAGAAAAGAAGGCAAGAAACGAGAAGATAGAGCAATTGGAGTCTGAACTCGGTCTTAGTGAGAAAGAAGTGGAAAAGTTCCGCGAGCTCTACCTAACTGAACAAGAACAAAAACTGGATTTGGAATCTGAGCTTAAGGATTGCAAGGTCAATCTGGAGAAAACCCGCAATGACTTGCATGATCTCCAAGAGAATTACAGGCTAGTAGTGTCAACACTAAAGGAGAAGGAGTTAACAATTTCCAAACTTTTGAAATCAGAAAATTCGTTAATTGAGCGTGCAAAGGAGTTGTGTACAGATCTGCAGAATGCATCGGATGATATTACTTCACTGTCCCTAAAGCTGGATCAGAAGGATAAGATGGAggaagaaaatcagaaaataatttcaaattttggtTCTCTGCTGAACCAGAGATTAGAAGACCTGCATAAGACCATCATGGGGTCGATTTCTCAACAACAGAAACAGCTGAGATCCATGGAAGACCATGCCAGCTCACATCTTACCAGTAAAAGTGAaGCAGCACAAGCTCTAGAATCAAGGATCAAGAAAATGACCGAGATATATACTTCAGGAATAGGAGCCCTGAAGGACTTATCCAACACATTTCACGTAAAAGTTTCATCTGACATGGAGCAGATACAATCTAAAGTCTCATCACAGACATTAGCTGCTGAGAATTTTCTTGCCACTGCGGTGCTTGAGGCCAAGGATGTTCTATGCAATATTCAGAACTCTCTTGATGAGCAAAAGCACTTGTTAGCATTCTCCATTCAACAACAAGAGGAGGGATTAAAGCAAAGTCTGAGTTCAGCACAAGTGATTTCAGAGGCAACTTTGAACTTCTTCAACGATATTCATCAGCATTCTTCAAGAGTGATGAAAATTATAGAAGAAACTCAGAATGAGAGAACCCACCAATTAGTTAATTTTGAGAAGCTGTTCAAGGAGGAGACTGCTAGGGAGGAAGAGCAGGCGTTGGAAAAAATTGCAGCAATTTTGGCAGCACTTACATCTAAGAGAACTGCTAGGGTCTCAGAGGCATCAAGAAATATGCAGGACACAAGCATGAAACAGTCTGGGAGACTACAGCTCGAGATGTGCAACATTCAGCAAGTTTCAAAAGATGCTAATAAGGAAGTTGGTGAATATCTAGAGAATGTGAAAAGTCATTACACAGTACAGATGTTCTCAGCAAGTGATTCTAGAGCTTTAATGGAAAATTGCCTTATGGATTGCTCAAAGAGAGTGGACTATTCAAGAGAGCAGTGGGAAAATGCCCAATCTTCCTTGAACAATCTCAACAAAAACAGGCTCACAGAGATAGAAAATACAGTAAAAACAAATATAAACTCAAATTATGCTTTGAATCAAGAATTTGTATCTGCATCATCATGCATGGCTTCAGATTATGATGCCGGAACCCATAACCTGCTTGAAGCAGTAAATGATTCACTAATGGTGGACCATGAGAACAAGAAGGAAATTGATTCTATAAGTAGACAATTGTTGGAGAAGCTCCATTCTGTACAAGAGAAGCACGGTGAAAGCATATTAAGCATCCAGGCGGAAACAGAAAAGAGCCTTGAACAAGATTACCTGGTTGATGAGCATACAAGTGGAACACCCAAGAAAAGAATGATAGTAGTTCCCAGCCTTGTGTCTATTGAAGAAATGAGGACACAAATCACAGAAGACAACAACAATTCAGAGAACAACAGATCAAAATGGATGGAGGCAGCAGAAAGCAAAATCCCACGTTTGACACCACCAGCAGCATCTCCAAATCGAACTCCTTTTGCAcatATCATTATGTCTTCACATCCAATGTTGGCCGGCATGAAGAGACagagagaaaatcaaataacaGAGAGAGATCTAGCCATTTCTCTAATGCTTCTCTCACAACAACCACACCAATTCACGAAGCCTCTCACCAAAaccccatcatcatcatcgccTCAGGAATTCGAATGCAAGACGTGCAACCGCAAGTTCTCGTCGTTTCAAGCACTGGGTGGTCACAGAGCAAGCCACAAGAAGCCCAAACTCAAttccgaagaagaagaagacagaaAGTCCATCAATTCcaataatagtaataacaaGAAGGCAAAAATGCACGAGTGCTCTATCTGCGGTCAGGAATTCTCGCTGGGACAAGCTCTTGGAGGACACATGAGGAAGCACAGGGCAGCCATGAACGAAGGGTTTGGGTCATCAATCAATGAAGTGGTTGCTGCTAAAGTGCCAGTTCTGAAGAGATCCAATAGCACCAGAGTGATGTGCTTGGACTTGAACTTGACGCCTCTCGAGAATGACTTGAAATTACTCTTCGGAAAGAATGCTCCTCAAGTTAATCTTTCTTTGTGTTGA 3702 0.4079 MSVTPDQSKKVGLGMTASPSPFLTPRPERRRTDSRGPDFNSNRLDKDKETNVQVLLRCRPLSEDEQKLNVPNVVSCNEHKREVTVASKQVDRIFAFDKVFGPKAQQRAIYDQAIAPIVNEVLDGYNCTIFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDMLEAQNADYSMKVTFLELYNEDITDLLAPEDNSSSRSVEEKQKKPLSLMEDGKGCVVVRGLEEESVYGVNEIYALLERGASKRRTAETLLNKRSSRSHSVLTITIYVKEAVIGGEELIKCGKLNLVDLAGSENILRSGAREGRAREAGEINKSLLTLGRVINALVEHSPHIPYRDSKLTRILRDSLGGKTKTCIIATISPSAYCLEETLSTLDYASRAKNIKNKPEANQKVSKAVLLKDLYMEIERMKEDVRAAREKNGVYVPHERFAREEAEKKARNEKIEQLESELGLSEKEVEKFRELYLTEQEQKLDLESELKDCKVNLEKTRNDLHDLQENYRLVVSTLKEKELTISKLLKSENSLIERAKELCTDLQNASDDITSLSLKLDQKDKMEEENQKIISNFGSLLNQRLEDLHKTIMGSISQQQKQLRSMEDHASSHLTSKSEAAQALESRIKKMTEIYTSGIGALKDLSNTFHVKVSSDMEQIQSKVSSQTLAAENFLATAVLEAKDVLCNIQNSLDEQKHLLAFSIQQQEEGLKQSLSSAQVISEATLNFFNDIHQHSSRVMKIIEETQNERTHQLVNFEKLFKEETAREEEQALEKIAAILAALTSKRTARVSEASRNMQDTSMKQSGRLQLEMCNIQQVSKDANKEVGEYLENVKSHYTVQMFSASDSRALMENCLMDCSKRVDYSREQWENAQSSLNNLNKNRLTEIENTVKTNINSNYALNQEFVSASSCMASDYDAGTHNLLEAVNDSLMVDHENKKEIDSISRQLLEKLHSVQEKHGESILSIQAETEKSLEQDYLVDEHTSGTPKKRMIVVPSLVSIEEMRTQITEDNNNSENNRSKWMEAAESKIPRLTPPAASPNRTPFAHIIMSSHPMLAGMKRQRENQITERDLAISLMLLSQQPHQFTKPLTKTPSSSSPQEFECKTCNRKFSSFQALGGHRASHKKPKLNSEEEEDRKSINSNNSNNKKAKMHECSICGQEFSLGQALGGHMRKHRAAMNEGFGSSINEVVAAKVPVLKRSNSTRVMCLDLNLTPLENDLKLLFGKNAPQVNLSLC 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0820 1233 ProSitePatterns Zinc finger C2H2 type domain signature. 1101 1121 IPR013087 -
Sto8g0820 1233 ProSiteProfiles Zinc finger C2H2 type domain profile. 1099 1126 IPR013087 -
Sto8g0820 1233 Coils Coil 407 427 - -
Sto8g0820 1233 Gene3D Kinesin motor domain 46 432 IPR036961 -
Sto8g0820 1233 Coils Coil 437 471 - -
Sto8g0820 1233 Pfam Kinesin motor domain 57 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto8g0820 1233 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sto8g0820 1233 MobiDBLite consensus disorder prediction 26 46 - -
Sto8g0820 1233 ProSitePatterns Zinc finger C2H2 type domain signature. 1152 1172 IPR013087 -
Sto8g0820 1233 Pfam C2H2-type zinc finger 1150 1174 - -
Sto8g0820 1233 Pfam C2H2-type zinc finger 1099 1124 - -
Sto8g0820 1233 ProSiteProfiles Kinesin motor domain profile. 51 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto8g0820 1233 MobiDBLite consensus disorder prediction 1 46 - -
Sto8g0820 1233 PANTHER KINESIN-LIKE PROTEIN KIN-5B 1 1045 - -
Sto8g0820 1233 MobiDBLite consensus disorder prediction 1122 1139 - -
Sto8g0820 1233 Gene3D Classic Zinc Finger 1097 1172 - -
Sto8g0820 1233 Coils Coil 762 782 - -
Sto8g0820 1233 SMART c2h2final6 1150 1172 IPR013087 -
Sto8g0820 1233 SMART c2h2final6 1099 1121 IPR013087 -
Sto8g0820 1233 Coils Coil 479 506 - -
Sto8g0820 1233 CDD KISc_BimC_Eg5 49 400 - -
Sto8g0820 1233 SMART kinesin_4 49 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto8g0820 1233 ProSiteProfiles Zinc finger C2H2 type domain profile. 1150 1177 IPR013087 -
Sto8g0820 1233 Coils Coil 525 545 - -
Sto8g0820 1233 SUPERFAMILY beta-beta-alpha zinc fingers 1099 1172 IPR036236 -
Sto8g0820 1233 PANTHER KINESIN-LIKE PROTEIN KIF11 1 1045 - -
Sto8g0820 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 431 IPR027417 -
Sto8g0820 1233 MobiDBLite consensus disorder prediction 1112 1145 - -
Sto8g0820 1233 PRINTS Kinesin heavy chain signature 124 145 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto8g0820 1233 PRINTS Kinesin heavy chain signature 258 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto8g0820 1233 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto8g0820 1233 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0820 Sto-Chr8 5185535 5192356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0820 51 437 Miscellaneous Gene Families AT4G39050 35.606 1.49e-57 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto8g0820 Kinesin 4.2e-115 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0820 K10398 - gmx:100794302 1513.43