Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0810 ATGGCTTTCTTCTCTGGAATCCGTCGTATTCTTCGCGAGTCTTCTGCTACTTCTTCAGTTCTCTATTCGCAATTCACGTCGATTCGTCTTAGTTCAACTCTCACATCCCCCAAGCTTTTCGTTAGTGGCCTTTCAAGACTGACTACAGATGAAAAACTAAGGGAAGCATTTACTCCCTTTGGGCAGCTGGTTGATGCTAAGGTCATAACCGACAGAGTCTCTGGAAGATCAAAAGGATTTGCCTTTGTAACTTATTCGACCATAGAAGAAGCTGAGAAAGCCAAAGAAGGAATGAATGCTAAGTTCTTGGATGGATGGGTTATTTTTGTTGATCCTGCCAAACCAAGAGAGCCCAAGCCTCCTCTGCAATCACAGTCCCAGACCTCCGAAACAGGTTTCACGGTGAACAAGACCATTGGATGGTGTGGTTGA 432 0.4491 MAFFSGIRRILRESSATSSVLYSQFTSIRLSSTLTSPKLFVSGLSRLTTDEKLREAFTPFGQLVDAKVITDRVSGRSKGFAFVTYSTIEEAEKAKEGMNAKFLDGWVIFVDPAKPREPKPPLQSQSQTSETGFTVNKTIGWCG 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0810 143 Gene3D - 13 127 IPR012677 -
Sto8g0810 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Sto8g0810 143 SMART rrm1_1 38 111 IPR000504 GO:0003723
Sto8g0810 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 105 IPR000504 GO:0003723
Sto8g0810 143 SUPERFAMILY RNA-binding domain, RBD 36 129 IPR035979 GO:0003676
Sto8g0810 143 PANTHER TRANSFORMER-2-RELATED 1 143 - -
Sto8g0810 143 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 6, MITOCHONDRIAL 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0810 Sto-Chr8 5113882 5116045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0810 30 125 Eukaryotic Initiation Factors Gene Family AT3G16380 28.125 1.30e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0810 - - zju:107432809 229.95