Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto8g0807 | ATGGTTAGAGTCAGCGTGTTGAATGATGCATTGAAGAGCATGTACAATGCTGAAAAGCGGGGAAAGCGACAAGTCATGATTAGACCTTCATCGAAGGTTATTATCAAGTTTCTCCTGGTCATGCAAAAGCATGGGTACATTGGTGAGTTTGAGTATGTTGATGACCACAGAGCTGGGAAAATAGTTGTTGAACTTAATGGAAGGTGGCCTTTCAAGACAATGTCTTCCAAATATAGAGGCGACAAAACAAAATCCGGGGTTTCAATCAGCGACTACCGCCTCAAGCTCTCCACGATGTAG | 300 | 0.4333 | MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRWPFKTMSSKYRGDKTKSGVSISDYRLKLSTM | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto8g0807 | 99 | Pfam | Ribosomal protein S8 | 7 | 65 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
| Sto8g0807 | 99 | Gene3D | - | 1 | 69 | - | - | |
| Sto8g0807 | 99 | PANTHER | 40S RIBOSOMAL PROTEIN S15A-1-RELATED | 1 | 69 | - | - | |
| Sto8g0807 | 99 | SUPERFAMILY | Ribosomal protein S8 | 4 | 73 | IPR035987 | GO:0003735|GO:0005840|GO:0006412 | |
| Sto8g0807 | 99 | PANTHER | 40S RIBOSOMAL PROTEIN S15A | 1 | 69 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto8g0807 | Sto-Chr8 | 5088456 | 5091052 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto8g0807 | 1 | 68 | Cytoplasmic Ribosomal Protein Gene Family | AT5G59850 | 95.588 | 1.76e-43 | 136 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto8g0807 | K02957 | - | gmx:100814599 | 135.961 |