Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0801 ATGGGAGAGGGAGCAGTCTTTGTCGAGTTAGCAGATGGAAGGAGGGAAAACGATGAGATACCAAGAACAGAACTGAAGCGAGACTACCAATGTCTCGTTGAGACTGAACCTGACCCTGCTCATAAGAAAGCAAAAGAAGTTTCCAATGATGACGTGCACTCTGAGGTGTCCAACCCCAATATTTCTTCGAGTGAGAATGCCTCAACTTCTCAAGATATCAGTAGCCAACCAACTGAGTTGGCAAACGTTAATCAGGCAGAGTGTGGGGATGTGGCATGCGCTTGTTTGGAGAATCCAATTTCTGATGAGACCTTGAGTGATGTAGGGGGTGATCAGAATAATGCTTCTCAGAATCATAAAGATTCGACTAGTGCTGCCGTGACATCCTGTGTTGTGATGGAAATTCCAAAGCATGCTAGTTCATCTGGAATCAGAAAGATAACTTTTAAGTTCAGTAAGAAGAAGGAGGACTACGACCATTCTCCTGTTCCTATAGCTATAGGCAGTCCTACTTTCTCCAACAATAGGCTTCAGTGTGGCTTTCATAAGGATGATGAAAAACTCTTGGCCAGGGATGACTGTAGTACGGGGATGCTAGAAAACTTACATGGTTTGGAAGACGTTCAAACTGAAGATTTTAACTTAGCTGTTCGTAACATGGAATTGAAAATGTCGAAGAAGGTAGTCCCGAGCTGTTATCCTACCAATGTGAAAAAGCTGTTATCCACTGGTATCCTTAACGGAGCTCgagtgaaatatatttatagtgCAGGAGAGATTGAGGTGCCTGGAATTATAGAGGGTGGTGGGTATGTGTGTGGCTGTTCAGTCTGCAATTATTCGAGAGTGCTTAGTGCCTATGAGTTTGAGCAGCATGCCGGTGCCAAGACCAGACACCCAAATAATCATATATTCCTGGAGAATGGAAGAccaatatatagtattataCAGGAAATCAAAACTGCTCCACTCAGCTTATTAGAAGAGGTGATAAAGGGTGTGGCTGGTTCATCTGTCAACGAGGAGTCATTTCAGATTTGGAAAGGTGATATTCTTTCAATGGTTTCTAAAAAGATAATGGGATATGCAATTATGCAATATGCATACAGCATACCcCACCTGTTCTGCAGACCAAGCTCCTATACTTCTAACCCTGGTAAACAACAGAAGAGAAGTGTTGATGGTTGTACTAAGAGAAGGGACAACGATCTTCATAGGTTGCTTTTTATGCCGAATGGATTACCAGATGGAGCTGAGTTGGCTTACTATGTCAAAGGACAGAAATTACTTGGAGGTTACAAACAGGGAAATGGTATAGTCTGTGTTTGTTGTGATAGAGAGATAAGCCCTTCACAGTTTGAGGCCCATGCTGGAATGGCTGCCAGGCGTCAACCTTATCGCCACATTTATACTTCCAATGGATTAACACTTCATGATATAGCCCTCTCATTGGCAAATGGTCAAAAGCTTACGATGGGCAACAGTGATGATATGTGTGCTGTATGTGGAGATGGTGGGGATTTGATTCTCTGCAATGGTTGTCCAAGGGCTTTTCATACAGCTTGCTTGGGTTTACAGTGTGTTCCAGAAAGTAGTTGGTGTTGTCTAAGCTGTAGAGATAACAATGGCAAAGAAGCCCCTACTACAATGCCTATCATGATACGGTTGACAAGTGTTGTTAAAACAAAAGACTATGAAACAGGTGGTTGTGTCGTTTGCAGGGAAAATGATTTCAGTGTTGTTAAATTTGATGAGCGAACAGTTATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGTTGCTTGCGGGACAGTGGACTTTGTGAATTGGAAGAACTGCCCAAGGATAAGTGGTTTTGTTGTGATGACTGCAATCGAATAAATGCAGCTGTACAGAGTTTAGTTTGCACTGGATCCGAGATTATACCAGCCTCTTTGTCAGACCTAATATATAGGAAGCATGAGGAGAGGGGATTATGTATTGATGGACATTTGAATGACATCCAGTGGCAAATTCTAAGAGGAAAAAGTCGCTATCCAGATCATTTGCCATTACTTTCACGGGCTGCTGCAATTTTTCGAGAGTGCTTTGACCCCATTGTTGCTATATCTGGTCGTGACCTCATTCCTGTTATGGTCTATGGGAGAAATATTTCAGGTCAAGAGTTTGGCGGGATGTACTGTGTCGTTTTAATAGTGAAATCTGTTGTTGTATCTGCTGGGCTCCTTAGAATATTTGGTCGTCATGTTGCTGAGCTTCCAATGGTAGCGACAAGTAGACAACATCAAGGGAAAGGCTATTTTCAAGCACTATTCTATTGCATAGAGAGATTGCTGTCTTCCCTGAATGTGGAAAAACTGGTGCTTCCTGCATCCGAGGATGCTGAATCAATTTGGACCAAGAAATTAGGTTTTCGAAAGATGAGTGAAGATCAGTTATCTAAGTATCTCCGAGAGGTTCAGCTGACCCTCTTTAATCGTACTTCAATGCTGGAGAAGACGGTGCAGCTGGGGACAGAATGA 2526 0.4216 MGEGAVFVELADGRRENDEIPRTELKRDYQCLVETEPDPAHKKAKEVSNDDVHSEVSNPNISSSENASTSQDISSQPTELANVNQAECGDVACACLENPISDETLSDVGGDQNNASQNHKDSTSAAVTSCVVMEIPKHASSSGIRKITFKFSKKKEDYDHSPVPIAIGSPTFSNNRLQCGFHKDDEKLLARDDCSTGMLENLHGLEDVQTEDFNLAVRNMELKMSKKVVPSCYPTNVKKLLSTGILNGARVKYIYSAGEIEVPGIIEGGGYVCGCSVCNYSRVLSAYEFEQHAGAKTRHPNNHIFLENGRPIYSIIQEIKTAPLSLLEEVIKGVAGSSVNEESFQIWKGDILSMVSKKIMGYAIMQYAYSIPHLFCRPSSYTSNPGKQQKRSVDGCTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCVCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQKLTMGNSDDMCAVCGDGGDLILCNGCPRAFHTACLGLQCVPESSWCCLSCRDNNGKEAPTTMPIMIRLTSVVKTKDYETGGCVVCRENDFSVVKFDERTVIICDQCEKEYHVGCLRDSGLCELEELPKDKWFCCDDCNRINAAVQSLVCTGSEIIPASLSDLIYRKHEERGLCIDGHLNDIQWQILRGKSRYPDHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCVVLIVKSVVVSAGLLRIFGRHVAELPMVATSRQHQGKGYFQALFYCIERLLSSLNVEKLVLPASEDAESIWTKKLGFRKMSEDQLSKYLREVQLTLFNRTSMLEKTVQLGTE 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0801 841 PANTHER AUTOIMMUNE REGULATOR 371 837 - -
Sto8g0801 841 PANTHER AUTOIMMUNE REGULATOR 39 355 - -
Sto8g0801 841 MobiDBLite consensus disorder prediction 33 52 - -
Sto8g0801 841 SUPERFAMILY FYVE/PHD zinc finger 494 544 IPR011011 -
Sto8g0801 841 Pfam Tify domain binding domain 432 481 IPR032308 -
Sto8g0801 841 Pfam Tify domain binding domain 264 318 IPR032308 -
Sto8g0801 841 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 566 628 IPR013083 -
Sto8g0801 841 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 678 828 IPR000182 GO:0016407
Sto8g0801 841 SUPERFAMILY FYVE/PHD zinc finger 561 625 IPR011011 -
Sto8g0801 841 CDD PHD1_AIRE 498 538 - -
Sto8g0801 841 ProSitePatterns Zinc finger PHD-type signature. 570 625 IPR019786 -
Sto8g0801 841 ProSiteProfiles Zinc finger PHD-type profile. 567 628 IPR019787 -
Sto8g0801 841 MobiDBLite consensus disorder prediction 33 78 - -
Sto8g0801 841 MobiDBLite consensus disorder prediction 53 78 - -
Sto8g0801 841 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 720 811 IPR016181 -
Sto8g0801 841 SMART PHD_3 569 626 IPR001965 -
Sto8g0801 841 SMART PHD_3 498 539 IPR001965 -
Sto8g0801 841 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 487 563 IPR013083 -
Sto8g0801 841 ProSitePatterns Zinc finger PHD-type signature. 499 538 IPR019786 -
Sto8g0801 841 ProSiteProfiles Zinc finger PHD-type profile. 496 541 IPR019787 -
Sto8g0801 841 Gene3D - 717 824 - -
Sto8g0801 841 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 371 837 - -
Sto8g0801 841 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 39 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0801 Sto-Chr8 5061340 5068409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0801 1 836 PHD Transcription Factor Family AT3G53680 51.570 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0801 - - gmx:100794242 1287.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0801 8 5061340 5068409 Sto8g0801 8 5061340 5068409 ECH