Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0798 ATGTCTACTTTTCTCAAGCCTGAAAATAGTTTGAAACGGGCTGAAGAGTTAATCAATGTTGGGCAGAAGCAGGCTGCTTTGCAAACTCTACATGACCTTATCACTTCAAAAAGATACAGGGCATGGCAGAAGACACTGGAAAGAATTATGTTCAAGTATGTAGAACTATGTGTAGACATGCGGAAGGGGCGGTTTGCAAAGGATGGGCTCATTCAGTATCGAATCATATGTCAGCAAGTAAATGTCAGTTCACTGGAGGAGGTGATCAAGCATTTCATGCATCTGTCAACTGAAAAGGCTGAACAAGCTCGCAGCCAGGCACAAGCATTAGAAGAGGCTCTTGATGTTGATGATTTAGAGGCGGATAAAAGGCCAGAGGACTTGATGCTAAGCTATGTAAGTGGGGAGAAAGGAAAAGACAGATCTGATCGGGAGCTTGTGACTCCGTGGTTCAAATTTTTGTGGGAAACATACAGGACAGTTCTTGAGATATTACGGAACAATTCAAAATTGGAGGCCCTATATGCTATGGCAGCACACCGGGCCTTCCAGTTCTGCAAACAATATAAGCGAACAACAGAGTTCCGAAGACTCTGTGAAATCATAAGAAATCATCTAGCCAATCTTAATAAATATCGTGATCAAAGGGACCGACCTGATCTTTCAGCTCCTGAAAGCTTGCAACTATATCTTGATACACGATTTGAGCAGCTAAAAATTGCAACTGAACTTGAACTTTGGCAGGAAGCCTTTCGATCCATTGAAGATATACATGGACTGATGGGCATGGTCAAGAAGACACCCAAGGCATCCTTGATGGTTGTTTACTATGCGAAGCTGACAGAAATATTTTGGATATCGTCAAGCCATCTTTATCATGCATATGCATGGTTTAAGCTGTTTTTGCTACAGAAGAGTTTCAATAAAAATCTGAGCCAGAAGGATTTGCAATTGATAGCTTCTTCTGTTGTTTTGGCTGCCCTTTCTGTGCCTCCTTATGATCACACCCGCGGTGCTTCTCACATGGAACTGGAGCATGCAAAAGAGAGAAACCTGAGGATGGCTAATCTCATTGGTTTCAATCTTGAAAACAAACCTGAGAGTAGAGAAGTGCTTTCGAGATCATCCCTGCTCTCTGAACTGGTGTCCAAGGGTGTGATGTCTTGTGTGACTCAGGAAGTGAAAGACATTTACCATCTGTTGGAACATGAATTTCTCCCATTAGATCTTGCATTAAAAGTTCAGCCCTTGTTAGCAAAAATCTCAAAGTTAGGGGGTAAGCTATCCACTGTGTCGGCTGTCCCTGAGGTACAGTTGTCTCAGTATATCCCAGCACTGGAAAAACTTTCTGCCTTGAGGTTGATACAGCAGGTGTCAAACGTCTACCAGACAATGAAAATTGAGACCTTGTCTGGGATGATCCCATTTTTTGATTTTTCTGTAGTAGAAAAGATTTCTGTGGATGCTGTGAAGCATAATTTTGTATCCATGAAAGTTGACCACATGAAAAGTGTCATTATTTTCTCCAAGATGAGTCTGGAGTCTGATGGCTTAAGGGATCACTTGGCCAGTTTTGCTGAACATTTGAATAAGGCCAGACAAATGATTCATCCTCCTGATAGGAAACAGTCAAAAATTGGAGCTTTGCTTCCTAATTTGACAGATATTGTGGCCAAGGAACACAAGAGGCTTCTTGCACGAAAGTCAATTATTGAGAAGAGgaaagaagaacaagaaagaCAGCTTCTTGAAATGGAACGGGAGGAGGAGTCAAAAAGATTAAGACTTCAGAAAATAACTGAGGAAGCAGAACAAAGAAGACTTGCCACCGAGTATGAGCAGAGAAAGAATCAAAGGATACTCAGGGAAATAGAGGAAAGGGAAATGGAAGAAGCCCAAGCTTTGCTTCAGGAGGCTGAAAAGCGTATcaagaagaagggaaagaagccAATCATAGAGGGGGAAAAGATGACCAAACAAACCTTGATGGAGTTGACTTTGACTGAGCAACTTCGAGAAAGAcaggaaatggaaaagaaactgCAAAAATTGGCCAAAACAATGGATTATTTGGAAAGAGCTAAGAGGGAAGAGGCTGCTCCCCTGATTGAAGCTGCTTATCAAAAGCGCCTAGTGGAGGAGAGGATTCTTCATGAGCGTGAGCAACAGCAAGAAGTTGAGCTTAGCAAACAGCGCCATGAGGGAGATTTAAAGGAGAAGGAGAGATTGGCTCGGATGATGGACAATATAGAGATATTTCGACAGAGAGTTGTCCATCGTCGTCAGGAAGAATTTAACAGATTAAGAAGGGAAAGAGAGGAGCGAATCTCTAGGATTTTGCAGTCCAGGAAACAGGAGCGAGAAAAGTTGAGGAAATTGAAGTATTATCTAAAGTTAGAAGAAGAACGACAACAAAAATTGCATGAGGAGGAGGAAGCACGGAAGCACGAagAGGCTGAGAGGCGAAGGAAGGAAGAGGCTGAACGCTTAGCAAAATTGGCTGAAATGGCCGAAAAGCAGAGGCAAAGGGAGAGGGAACTTGAAGAAAAGGAGAGGCAAAGGAGAGAAGCACTGTTGGGCAGATCTACTGAAGCAACTTTGAAGCCTTCTGAACCTCCCCGTACATTGGATACAGGATCTGCTGCTCCTGCAGCTGCTGCAGCACCCTCCTCAGCCCCAGGGAAATACGTTCCCAAGTTCCGACGTGAGAGAACCGAAGGAACAGCGCCTCCTCCTCCAGACAATGATCGTTGGACTAACGCCGGCAGCAGACAGGATGGTGACAGGTGGCGAAGTGATGATCGCAGACCTGCATTTGGTGCTGGTGGGGGTTCAaggtcatcatcatcatggtcATCATCCAGGAATCGATGA 2874 0.4266 MSTFLKPENSLKRAEELINVGQKQAALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMAAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSIEDIHGLMGMVKKTPKASLMVVYYAKLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPYDHTRGASHMELEHAKERNLRMANLIGFNLENKPESREVLSRSSLLSELVSKGVMSCVTQEVKDIYHLLEHEFLPLDLALKVQPLLAKISKLGGKLSTVSAVPEVQLSQYIPALEKLSALRLIQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKHNFVSMKVDHMKSVIIFSKMSLESDGLRDHLASFAEHLNKARQMIHPPDRKQSKIGALLPNLTDIVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKRLVEERILHEREQQQEVELSKQRHEGDLKEKERLARMMDNIEIFRQRVVHRRQEEFNRLRREREERISRILQSRKQEREKLRKLKYYLKLEEERQQKLHEEEEARKHEEAERRRKEEAERLAKLAEMAEKQRQRERELEEKERQRREALLGRSTEATLKPSEPPRTLDTGSAAPAAAAAPSSAPGKYVPKFRRERTEGTAPPPPDNDRWTNAGSRQDGDRWRSDDRRPAFGAGGGSRSSSSWSSSRNR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0798 957 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 930 IPR027512 GO:0005852
Sto8g0798 957 SMART PINT_4 441 532 IPR000717 -
Sto8g0798 957 Gene3D - 339 494 - -
Sto8g0798 957 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 906 - -
Sto8g0798 957 Gene3D UVR domain 217 269 - -
Sto8g0798 957 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Sto8g0798 957 MobiDBLite consensus disorder prediction 943 957 - -
Sto8g0798 957 Pfam PCI domain 373 510 IPR000717 -
Sto8g0798 957 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Sto8g0798 957 Coils Coil 615 649 - -
Sto8g0798 957 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 906 IPR027512 GO:0005852
Sto8g0798 957 Coils Coil 796 856 - -
Sto8g0798 957 MobiDBLite consensus disorder prediction 921 936 - -
Sto8g0798 957 Coils Coil 667 697 - -
Sto8g0798 957 Coils Coil 561 602 - -
Sto8g0798 957 Coils Coil 93 120 - -
Sto8g0798 957 MobiDBLite consensus disorder prediction 804 957 - -
Sto8g0798 957 MobiDBLite consensus disorder prediction 804 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0798 Sto-Chr8 5040639 5045958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0798 1 957 Eukaryotic Initiation Factors Gene Family AT4G11420 72.456 0.0 1331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0798 K03254 - gmx:100782598 1381.31