Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0780 TTGGATTCCCAAAATCTTTATGAACTTCAGTCTACTCCACAACCTGAGACAAAGCGTATTACTGTTCTTAAACCTTCAAAGATGTTTCACAACAATGACATATCTgctgtgaaggagaaggatgataaacacataaaaaaacCAGCAAATGTTGGTCAAGCAGCTGTGTGGGGCATGAAGAACCCTGGATATTCTCCAGCCACTCAGAAagttgatgattatcaagttcaaCATACTAGAATAGTGGTATTGAAGCCTAGCTCTGGTAAGACACGTGAGTTTAAGGCTGTGGTTTCTCCAACTTCTTCATCACCTCAAAATTTGCCAAGTGGGCATTTCTATCAGGGACCTGAAGATGGTGATGAACCAGAATCAAGAAAAGAGGCTAAAGAGATTACACGCCAAGTCCATGAAGACCTGTCAAGCCATCAAAGAGATGGAACTTTGTATTCTTCAGTCTTCTCCAACGGTTACACGGGTGATGAGAGTTCATTTAACAGATCAGAAAATGATTATGCAGCAGGGAATTTTAGTGATTTGGAAGTTATGTCACCATCTCCAAGGCATTCCTGGGATTATGTCATTCGCTGTAATAGTCCTTATTCTCCATCCTTTAGTCGTGCATCATTTTCTCCCGAGTCATCAGTTTGCAGAGAGGCAAAGAAGCGACTTTCTGAAAGATGGGCCATGATAGCATTGAATAAGGGTCCTCAAGAACAAAGGCATGTGCGCAGGAGCTCTTCCTTGGGTGAGATGCTTGCTCTTTCGGATATGAAGAAATCTGCATCATCTGAGATTGAGGTAACTAATAAAGAACATAAGCCAAGGGAAACTAATTCCTGCACTAGTAATACCATTGAAGAAATACAGGTGAATGGTTCTcctaaaaatcttcccaggtcaaaATCTGTCCCTGTATCTTCCACTGTTTATGATACTGGGCTCAGTGTTGGAAATTGTGATCCTGAGGCTGGCAAAGTACACGACTCCAAGGAGCTGGCAAAGTCAAAAAGTATGAAATCATTTAAAGGGAAAGTTACAAGTTTGTTCTTTTCAAGGAATAAGAAATCAACTAAGGAAAAATCTAGTCTTTCTCAATCTAATGATGAGTCGCAATCTACAGTCTCTGAAACATCAGTATCTCTAGCAAATTCTTCCAGAAACCTTGGGGATAACATGTCTCAAAGCATCGGCAATGGTGGAATTGGAGAGTGTCCTCTTCCTGTTCAATTTGAATCATCAGGCAAAACTTTATCTGATTCACTCTCCAAGGGACAGGGCACAATATCTCTAGAGcGTGAATTGACTGTGTCAAAGCCCATGGTGCATGGGATATCAAGCGAAAACCAGGATCAGCCAAGTCCCATCTCAGTTCTAGAACCTTTGTTTAGAGATGATAATGGAGCTCAGCAGTCCTTGGACTGTATGAAGGCTGGTCACTCGGGAACAGGGGTGCCTCTAAAGTCTAATTTAATTGACAAATCACCACCCATAGGATCAATAGCTCGGACCCTGTCTTGGGAAGATTCTTGTGCAGATGTAGCAAGTCCATATCCCCTAAAATCCTTGACAGTTTCCTTAGACAGCAAGGTAGAGGAACAAGACTGGCTTGTCTTTGTCCAGAAACTACTATCAGCAGCTGGACTTGATGATCAAGTGCATTCAGACTCGTTCCACTCTAGATGGCATTCTCTGGAAAGCCCATTGGATCCGTCATTAAGGGACAAATATGCCAATCTGAATGACAAGGAGCCTCTCCATGAGGCCAAACGAAGGCAGAGGAGATCAAATCAGAAGCTTATATTCGACTGTGTCAATGCTGCACTAAAGGAAATTACTGGGCATGAATCAGAAATATACTTAATGGGCAGAATGTGCAGTAGGGGCCATAGCAGTCTCCCAGAGGGTACATCACCCCTAGTAATGGACCTGATAGTGACCCAAATGAAGGAATTATTATTTAGTGAGGTGAGTTGTGTTTGGGGAGAATGTGGGGACAGCAACAGCCTGGTGGTGGAGAGGGTTGTCAGGAAAGAGGTTGTGGGAAAAGGGTGGGTTGAGCTTATGGAAATGGAAACTGTCCATTTAGGAAGAGAGATTGAAGGGAAGCTACTTGAAGAGCTTGTGGAGGAGGCTGTGGTGGATTTAACAGGTAGGACCCTATGA 2166 0.4155 LDSQNLYELQSTPQPETKRITVLKPSKMFHNNDISAVKEKDDKHIKKPANVGQAAVWGMKNPGYSPATQKVDDYQVQHTRIVVLKPSSGKTREFKAVVSPTSSSPQNLPSGHFYQGPEDGDEPESRKEAKEITRQVHEDLSSHQRDGTLYSSVFSNGYTGDESSFNRSENDYAAGNFSDLEVMSPSPRHSWDYVIRCNSPYSPSFSRASFSPESSVCREAKKRLSERWAMIALNKGPQEQRHVRRSSSLGEMLALSDMKKSASSEIEVTNKEHKPRETNSCTSNTIEEIQVNGSPKNLPRSKSVPVSSTVYDTGLSVGNCDPEAGKVHDSKELAKSKSMKSFKGKVTSLFFSRNKKSTKEKSSLSQSNDESQSTVSETSVSLANSSRNLGDNMSQSIGNGGIGECPLPVQFESSGKTLSDSLSKGQGTISLERELTVSKPMVHGISSENQDQPSPISVLEPLFRDDNGAQQSLDCMKAGHSGTGVPLKSNLIDKSPPIGSIARTLSWEDSCADVASPYPLKSLTVSLDSKVEEQDWLVFVQKLLSAAGLDDQVHSDSFHSRWHSLESPLDPSLRDKYANLNDKEPLHEAKRRQRRSNQKLIFDCVNAALKEITGHESEIYLMGRMCSRGHSSLPEGTSPLVMDLIVTQMKELLFSEVSCVWGECGDSNSLVVERVVRKEVVGKGWVELMEMETVHLGREIEGKLLEELVEEAVVDLTGRTL 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0780 721 MobiDBLite consensus disorder prediction 94 111 - -
Sto8g0780 721 MobiDBLite consensus disorder prediction 324 338 - -
Sto8g0780 721 MobiDBLite consensus disorder prediction 93 132 - -
Sto8g0780 721 Pfam Domain of unknown function (DUF4378) 537 711 IPR025486 -
Sto8g0780 721 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 3 719 - -
Sto8g0780 721 MobiDBLite consensus disorder prediction 364 399 - -
Sto8g0780 721 MobiDBLite consensus disorder prediction 117 132 - -
Sto8g0780 721 MobiDBLite consensus disorder prediction 315 338 - -
Sto8g0780 721 MobiDBLite consensus disorder prediction 355 405 - -
Sto8g0780 721 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 3 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0780 Sto-Chr8 4931440 4934302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0780 4 717 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 42.701 1.35e-145 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0780 - - var:108322999 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0780 8 4931440 4934302 Sto13g3347 13 36871276 36875286 CCT
Sto8g0780 8 4931440 4934302 Sto8g0780 8 4931440 4934302 ECH