Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0770 ATGAGGGTAAAAGCCGAAAGGGgagaaaccaatgaaggagagaagatttCCAGTGAGGAAAGATGGATGAGCATACAAAATAGAACAGAGAGGTTGAGTTCATGGAAGAAACAGAGCACTTCTGAGGAAAAGCCAAAAAGAGAGACCACTATGCTGTTTCTTCCTCCCAGCTTGCTATGCTATCATGTGGATGATGCTTGTCGGCGACGGCTTTGCCGAAAATTTAGGAGTCATTTAGTACTCCACGGCAAGTCTCCATGGAGTGTTATCCACAGATCTCACAGGGATAAATTCCAAGTGTGCTTGCTTATAAATGATACTAAGTCTTTCAATTCTTTCATAGTGGAATCATTCTCTACGAGTGTGTCATTTGTTTTATCAAAAGCAGCCAAGCCACGGTTAGTTAATCCTTCTCTAGGACCATCTTCTGCACCCGGGCCATCTCCATTTGATCAAgGTCCTAGCGTGATTAGAAGACCAAGGCGTCATCATCGTCAAAGTGGGAGGCCTTACTTTTTTGCTGCACCCCCTTCTGAAGGCCAAGATTGTGACCAAAAGTGTATGGAGCCGCTCACAGTAACTCTCTTTCGTTCAACTTGTAGCTGTGTGTTTCCCATGAAAGTCAGACTTATGTTGGATGTAGCTCTCTATGCTGTTTTTCCAGTAATGAATGAGTTAGAGATTGAAGTTGCATCGGGCATATATATGGAACAGAGTCAGGTGAAGATAATGGGCGCCACTGCTGACAATCAAAATCAGGAAAGAACTGTAGTCGATATTAACCTGGTTCCATTGGGAGAGAAATTTGACAATACCACTGCATTTTTGACATATGAGAGGTTTTGGCAACAGAAAGTTACTCTAAATAGAAGCCTTTTTGGTGACTATGCAGTCATGTACATTAGTTACCCAGGGAttccatcaccaccaccatttGGAAGTGACATGGGGAGTTACCAAAGTGGAAATGCCAGTAGACTTCCATTCACTGCCATCTTCATAAAAAAGAACCAGAATATTAATCTTAGAACCATAATAATCATTGCTTTGTCTACCTTTGTACTCATGTTGGTTTTGCTTGGAGCATTTGTCATCTTCCTGAGATGGAGGAAGGTTGGAAGACCATCAAGAGCTGTTGGTCCTGCGTTCAAATCATCTATTAACAAGAGATCTGGCATGAGGTTTATTTTGTCAAGCAGTATTACAAGCTCGACATCAATGTCACTTATGTCCAACATGGCTACTTCAATTCTCTCTGCTAGAACGTTTGCTCTTTCGGAGCTTGAAAAAGCAACCAATAAGTTCAGTTCAAAGAGAGTTTTAGGAGAAGGAGGATTTGGACGTGTTTATCATGGTACTTTGGAAGATGGAACTGAAGTTGCAGTTAAGCTACTAACAAGGAATAATCAGAATGGAGACTCAGAATttattgcagaagttgagatgCTAAGCCGCTTGCATCACTGTAACCTTGTGAGACTCATTGGTATTTGCATTGAAGGGCGCAGACGATGCTTGGTATATGAGCTTGTTCCCAATGGCAGCGTTGAGTCCCATTTGCATGGTGTTGGCCAGAAAAAGGGACCTCTAGATTGGGAAGCACGGATGAAAGTTGCTCTTGGTGCTGCAAGAGGATTGGCTTATCTTCACGAGGATTCTAATCCTCGTGTAATTCATCGTGACTTCAAAGCTAGTAATGTGTTATTAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGGTTGGCAAGAGAAGCAACTGAAGGAAGTAATCATATTTCAACGCGAGTCATGGGAACTTTTGGGTATGTTGCTCCAGAATACGCAATGACGGGCCATTTACTTGTTAAAAGTGATGTCTATAGTTATGGTGTAGTGCTGCTTGAACTTCTGACTGGCAGAAAACCAGTGGACATGTCTCAACCTCATGGACAGGAGAACCTTGTAACCTGGGCACGACCACTCTTGGCTAGTAGAGAAGGTCTAGAACAGCTAGTAGATCCATCTTTGGCTGGAAGTTATGATTTTGATGACATGGCAAAGGTGGCTGCCATTGCTTCAATGTGTGTGCATCCAGAGGTCACTCAAAGACCTTTTATGGGTGAAGTTGTGCAAGCTCTGAAGTTGATATACAATGATGCAGATGAGACTTGTGGGGATTACTGTAGTCAGAAGGATTCTTCTACTCACGAGTCTGACTTTAGAGTCGATCTTGCTCCTTCTGAAAGCAGTTGGTGGAATGCTGGAGGAGCAACTCCACGATTAACTTATGGGCAACCATCTTCCTTCATCTCAATGGACTACAGTTCTGGCCCACTTGAAATGGAAAACAGACCTTTTTCAACTTCAAGCTTAAATGGGGATGAGATCTCTTTGCCGGTTATGCATGAGATTGAGAACAGATCAGGTCCCTTAAAAACCGTTCGAAGTAAGTTATCCTTGTATAAATTTATTGGGAGTCGCAGTGAACATGGGGGACTTCGTTCCAAGAATGTTTGGAATAAAGGTTTCTGGGTTTAA 2520 0.4151 MRVKAERGETNEGEKISSEERWMSIQNRTERLSSWKKQSTSEEKPKRETTMLFLPPSLLCYHVDDACRRRLCRKFRSHLVLHGKSPWSVIHRSHRDKFQVCLLINDTKSFNSFIVESFSTSVSFVLSKAAKPRLVNPSLGPSSAPGPSPFDQGPSVIRRPRRHHRQSGRPYFFAAPPSEGQDCDQKCMEPLTVTLFRSTCSCVFPMKVRLMLDVALYAVFPVMNELEIEVASGIYMEQSQVKIMGATADNQNQERTVVDINLVPLGEKFDNTTAFLTYERFWQQKVTLNRSLFGDYAVMYISYPGIPSPPPFGSDMGSYQSGNASRLPFTAIFIKKNQNINLRTIIIIALSTFVLMLVLLGAFVIFLRWRKVGRPSRAVGPAFKSSINKRSGMRFILSSSITSSTSMSLMSNMATSILSARTFALSELEKATNKFSSKRVLGEGGFGRVYHGTLEDGTEVAVKLLTRNNQNGDSEFIAEVEMLSRLHHCNLVRLIGICIEGRRRCLVYELVPNGSVESHLHGVGQKKGPLDWEARMKVALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPHGQENLVTWARPLLASREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDADETCGDYCSQKDSSTHESDFRVDLAPSESSWWNAGGATPRLTYGQPSSFISMDYSSGPLEMENRPFSTSSLNGDEISLPVMHEIENRSGPLKTVRSKLSLYKFIGSRSEHGGLRSKNVWNKGFWV 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0770 839 CDD STKc_IRAK 441 710 - -
Sto8g0770 839 Gene3D Transferase(Phosphotransferase) domain 1 511 732 - -
Sto8g0770 839 MobiDBLite consensus disorder prediction 1 20 - -
Sto8g0770 839 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 107 836 - -
Sto8g0770 839 PANTHER OS01G0750732 PROTEIN 107 836 - -
Sto8g0770 839 Pfam Protein tyrosine and serine/threonine kinase 437 706 IPR001245 GO:0004672|GO:0006468
Sto8g0770 839 SUPERFAMILY Protein kinase-like (PK-like) 414 710 IPR011009 -
Sto8g0770 839 ProSiteProfiles Protein kinase domain profile. 435 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0770 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 557 569 IPR008271 GO:0004672|GO:0006468
Sto8g0770 839 ProSitePatterns Protein kinases ATP-binding region signature. 441 463 IPR017441 GO:0005524
Sto8g0770 839 MobiDBLite consensus disorder prediction 137 163 - -
Sto8g0770 839 Gene3D Phosphorylase Kinase; domain 1 406 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0770 Sto-Chr8 4844597 4851826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0770 182 825 Receptor kinase-like Gene Family AT5G56890 52.687 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sto8g0770 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0770 - - gmx:100815554 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0770 8 4844597 4851826 Sto13g3356 13 36944219 36950190 CCT
Sto8g0770 8 4844597 4851826 Sto8g0770 8 4844597 4851826 ECH