Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0760 ATGGCTATCTCGCAATTGCTCGATAGAATCTCTGCTTCATCTTTATTACCAGGATCCTCGTCGAATACCCTTTTGAGAACGATCCTTGGATTGCCCGTGTTGGAACTAGCGGCAATCTGCGTTAACTTGACTATTCTTCTTGTGTTTCTCTTTGTAATCTCCGCCAGACGGATTTTTGTGTGTGTCGATCGAATTCGAATAAGCAAGGATAATACGGCTGGGAATCCAAATCCAATTCGTCATAGTATTATTGATGGAGAAATAAATGACGTTAGAATCGGTACAGGGTTCAAATTGTCGCTGTTGTGTTGTTTCTATGTGCTCTTCGTGCAAGTTTTGGTGTTAGGATTCGACGCAGCATCTTTGATCAGAGGAGCGACTAATGGGAAGACTGTAAAATGGTCTCTTATTTCTTTGCCAGCAGCTCAGGGTTTAGCTTGGTTTGTGATAAGCTTCTCTGCTTTGCATTGCAAATTCAAGGTGTCAGAGAAGTTTTCTTTGTTGCTGAGGGTTTGGTGGGTTGTCTCATTTGTGATTTGCTTGTGTACTTTGTACGTTGATGGGAGATTAATTTTGGTGGAAGGTTCAAAACACCTTTCCTCTCATGTTGTGGCCAATTTTGCTGTCACTCCGGCTCTTGCCTTTCTGTGTATTGTCGCAATCCGAGGCGCTACCGGCATTCAAGTTTGTAGAAACTCTGATCTTCAACAGCCATTACTCCTTGAAGAAGAAGCAGGGTGCCTCAAGGTTACTCCTTACTCTGATGCTGGGATTTTTGGCTTGGCCACTCTTTCTTGGTTAAACCCACTTCTTTCCATTGGTGCAAAGAGACCGCTTGAGCTTAAGGACATTCCCCTTCTTGCACCAAAAGATCGAGCTAAGACCAATTATAAGAGTTTGAATTCAAACTGGGAGAGATTGAAGGCTGAAAATCCTTCAAAGCAGCCTTCTTTAGCTTGGGCCATTCTCAGGTCATATTGGAAGGAGGCAGCTTGTAATGCCATATTTGCTGGTGTGAATACTCTTGTCTCGTATGTAGGTCCATACATGATTAGTTACTTCGTTGATTACTTGGGTGGTAAGGAGACTTCCCCTTATGAAGGGTATATCCTTGCGGGTACATTCTTTGCTGCAAAGCTTGTGGAGACCCTAACAACTAGGCAGTGGTATCTTGGGGTGGATATCTTGGGTATGCATGTTAGATCAGCTCTAACAGCAATGGTATATCGAAAAGGACTCAGACTCTCAAGCTCGGCCAAGCAAAGTCACACAAGTGGGGAGATTGTTAACTACATGGCTGTGGATGTTCAGAGGGTAGGAGACTACTCTTGGTATCTTCATGACATGTGGATGCTTCCTCTTCAAATTATTCTTGCCCTTGCAATTTTGTACAAGAACGTTGGAATTGCTTCAATTGCAACATTGATTGCTACAATAATTTCAATAGTTGTCACTATTCCCGTGGCTAGGATACAAGAAAATTATCAAGACAAATTAATGGCTGCTAAGGACGAAAGAATGAGAAAAACATCTGAGTGCCTGAGGAATATGAGGATCCTCAAGCTGCAAGCTTGGGAGGATAGATATCGAATAAAATTGGAGGAGATGCGTGGAGTAGAGTTCAAGTGGCTGCGCAAAGCTCTCTATTCTCAGGCTTTCATTACCTTCATCTTCTGGAGCTCTCCTATATTTGTTTCAGCTATCACTTTTGGTACTTCGATATTGTTGGGTAGTCAGTTGACTGCAGGTGGAGTTCTTTCTGCTCTGGCTACCTTCAGGATCCTTCAAGAACCTTTAAGGAATTTTCCTGACTTGGTATCAACAATGGCTCAGACCAAAGTTTCTCTTGATCGCATATCTAGTTTCCTGCTGGAGGAAGAATTGCAAGAAGATGCAACTACCACCTTGCCACGAGGAGTTTCTGACATCGCCATTGAGATTAAGGATGGATTCTTCTGCTGGGACCCTACTTCTAGGCCTACTTTATCAGGGATAAACTTGAAAGTGGAAAGGGGGATGCGTGTAGCTATTTGTGGCATGGTTGGTGCtgggaaatcaagttttctttcTTGCATCCTTGGAGAGATACCTAAGCTTTCTGGTGAAGTAAGAGTGTGTGGCTCTTCTGCATATGTCTCCCAATCAGCATGGATACAGTCAGGAAATATAGAAGAAAATATCCTCTTTGGAAGCCTGATGGATAAAGCAAAGTACAAAAGAGTTCTTCATGCTTGTTCACTGAAACGTGACCTGGAACTTTTCTCACACGGAGACCAAACAATTATAGGTGATAGAGGTATAAACCTGAGTGGAGGCCAGAAGCAGCGGGTGCAGCTTGCACGGGCTCTTTACCAAGATGCTGATATTTATCTCCTTGATGATCCCTTCAGTGCTGTTGATGCCCACACTGGATCAGAATTGTTTAGGGAGTACATATTGACAGCACTAGCTGATAAAACAGTCATTTTTGTGACCCATCAAGTGGAATTTCTTCCTGCAGCTGATATTATAGTGGTTCTTAAAGAAGGCCGCATCATACAGGCAGGAAAATATGATGATCTCTTACAAGCAGGAACAGATTTTAATACTCTAGTTTCAGCTCACCATGAAGCTATTGAGGCTATGGATATTCCTAATCACTCAGAAGATTCAGATGAAAATTTATCCTTGGATGCATCTGTTATGGCCAGTAAGACATCCATTGTATCTGCAAATGATATTGACACTTTGGCAAAGGAAGTGCAAGAGGGTTCATCAGTTTCAGATCAGAAAGCAATCAAGGAGAAGAAAAAAGCAAAACGCTCAAGAAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTAAGAGGTAGAGTCAGCATGAGGGTGTACTTGTCATACATGGCTGCAGCATATAAAGGCTTATTGATTCCACTCATAATCATTGCACAAGCATTATTTCAATTCCTTCAAATTGCAAGTAATTGGTGGATGGCTTGGGCAAACCCTCAAACTGAAGGAGACCAACCCAAAGTAACTCCCATGGTTTTGATTCTAGTGTACATGGCTCTTGCTTTCGGGAGCTCATGGTTTATATTTATAAGGGCTGTTCTGGTAGCTACATTTGGTCTAGCAGCTGCACAGAAGCTTTTTGTAAAGATGCTTAGAAGTGTTTTCCACGCACCAATGTCTTTCTTTGACTCCACCCCCGCTGGAAGGATATTGAATCGGGTGTCGATTGATCAAAGTGTTGTGGATCTTGACATTCCCTTTAGACTAGGAGGGTTTGCTTCAACAACAATACAACTTATTGGCATTGTCGGTGTAATGACAAAAGTTACCTGGCAAGTTTTGCTTCTAGTTGTCCCCATGGCTGTTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAGCTAGTTCGTATTGTAAGCATTCAGAAATCTCCCGTGATACATCTTTTTGGTGAATCAATTGCTGGAGCAGCAACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGAAACCTTTATCTTCTGGACTGTTTTTCACGGCCATTCTTCTGCAGTCTTGCTGCTATTGAGTGGCTCTGCCTGCGCATGGAATTACTGTCAACCTTTGTATTCGCTTTCTGCATGATATTACTAGTCAGCTTTCCACATGGAAGTATTGACCCTaGCATGGCTGGACTTGCTGTGACATATGGCTTGAATTTAAATGCACGCCTATCACGATGGATACTAAGCTTTTGCaaacttgaaaataaaataatatccaTTGAAAGGATTTATCAATACAGCCAAATCCCCAGTGAAGCACCAACAGTTATTGAGGATACTCGTCCTCCATCCTCATGGCCAGAGAATGGGACAATTAGTTTGGTTGATTTGAAGGTTCGTTACAAGGAGAATCTTCCTTTGGTGCTTCATGGAATATCCTGCACATTTCCTGGTGGGAAGAAGATTGGAATAGTTGGACGTACTGGAAGTGGCAAGTCTACTATGATTCAGGCATTATTTCGATTAATCGAACCATCAAGTGGGAGCATCCTCATAGACAACATCGATATCTCAAGCATTGGCCTCCATGACCTTCGAAGCCGTCTGAGTATCATACCACAAGATCCAACCTTATTTGAAGGAACCATACGAGGCAATCTTGATCCTCTTGAAGAGCACTCAGATAACGAGATTTGGGAGGCGCTAGACAAGTCTCAACTTGGGGAAATTATCCGCCAGAAAGAGCAAAAGCTGGATACACAAGTGATTGAAAATGGAGATAATTGGAGTGTAGGGCAGAGGCAGCTTGTTTCCTTGGGGCGGGCTTTGCTTAAGCAATCAAAGATACTTGTACTTGATGAAGCAACAGCATCAGTTGATACAGCCACCGATAATCTTATACAGAAGATTATTCGAACAGAGTTTAGGGACTGTACTGTGTGCACTATTGCACACCGTATTCCTACTGTTATTGACAGTGATCTTGTTCTTGTACTCAGTGATGGTCAAGTGGCATTCCAGATTTTTGAAGTAATGGCATGCCAGAAAGCCTTGGAAGCTAGTGGTGGAAACTGGAAAGAGTTCAAGAAAGATGATAAGTTGAAGCAGCAAGAGGGCTGCCTCAGTTGCTGCTGCTGCAGCATTCGGAGCATTCAGAGACCAATCAAAGGGGAAGGAAGAGAGGAGTGCGCTCACAGCTTCTCCCCTATTGTGAACTTGTTCTTTAAGATGTTTGAGTTGAGCCAAAAGAGCTTCCCAAATTTGGCTTCTCCTTATTCTGATCCAATCACCCCTCTTTCTTATAATCAACCTTACTGCTATTCTTCCCATGTACTACCCTCTGCAATTATTCAACAATCTCCTTATGTGATGGACGGCTTTCAACATCTCACACCGACCTTGCCTAACCAAGAAAGTCATGGTTTTGCAAATTTACAAGATAACCCTGCCTTGAATTATAACAATTTCAATCATTATGCTGAGTTATTGTCAGCGAATTCGAACTCGGACATTGGAATGGAAGAAAGCCTGTAA 5022 0.4231 MAISQLLDRISASSLLPGSSSNTLLRTILGLPVLELAAICVNLTILLVFLFVISARRIFVCVDRIRISKDNTAGNPNPIRHSIIDGEINDVRIGTGFKLSLLCCFYVLFVQVLVLGFDAASLIRGATNGKTVKWSLISLPAAQGLAWFVISFSALHCKFKVSEKFSLLLRVWWVVSFVICLCTLYVDGRLILVEGSKHLSSHVVANFAVTPALAFLCIVAIRGATGIQVCRNSDLQQPLLLEEEAGCLKVTPYSDAGIFGLATLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYKSLNSNWERLKAENPSKQPSLAWAILRSYWKEAACNAIFAGVNTLVSYVGPYMISYFVDYLGGKETSPYEGYILAGTFFAAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPLQIILALAILYKNVGIASIATLIATIISIVVTIPVARIQENYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAITFGTSILLGSQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISSFLLEEELQEDATTTLPRGVSDIAIEIKDGFFCWDPTSRPTLSGINLKVERGMRVAICGMVGAGKSSFLSCILGEIPKLSGEVRVCGSSAYVSQSAWIQSGNIEENILFGSLMDKAKYKRVLHACSLKRDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALADKTVIFVTHQVEFLPAADIIVVLKEGRIIQAGKYDDLLQAGTDFNTLVSAHHEAIEAMDIPNHSEDSDENLSLDASVMASKTSIVSANDIDTLAKEVQEGSSVSDQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMRVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDQPKVTPMVLILVYMALAFGSSWFIFIRAVLVATFGLAAAQKLFVKMLRSVFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTKVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPVIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFSRPFFCSLAAIEWLCLRMELLSTFVFAFCMILLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTVIEDTRPPSSWPENGTISLVDLKVRYKENLPLVLHGISCTFPGGKKIGIVGRTGSGKSTMIQALFRLIEPSSGSILIDNIDISSIGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLEEHSDNEIWEALDKSQLGEIIRQKEQKLDTQVIENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRTEFRDCTVCTIAHRIPTVIDSDLVLVLSDGQVAFQIFEVMACQKALEASGGNWKEFKKDDKLKQQEGCLSCCCCSIRSIQRPIKGEGREECAHSFSPIVNLFFKMFELSQKSFPNLASPYSDPITPLSYNQPYCYSSHVLPSAIIQQSPYVMDGFQHLTPTLPNQESHGFANLQDNPALNYNNFNHYAELLSANSNSDIGMEESL 1673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0760 1673 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 645 867 IPR003439 GO:0005524
Sto8g0760 1673 CDD ABC_6TM_ABCC_D2 969 1263 IPR044726 GO:0140359
Sto8g0760 1673 Coils Coil 926 946 - -
Sto8g0760 1673 SUPERFAMILY ABC transporter transmembrane region 320 625 IPR036640 GO:0005524|GO:0016021
Sto8g0760 1673 Coils Coil 492 512 - -
Sto8g0760 1673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1279 1501 IPR027417 -
Sto8g0760 1673 CDD ABC_6TM_ABCC_D1 332 619 IPR044746 GO:0140359
Sto8g0760 1673 CDD ABCC_MRP_domain2 1286 1501 - -
Sto8g0760 1673 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1288 1522 IPR003439 GO:0005524
Sto8g0760 1673 Coils Coil 290 310 - -
Sto8g0760 1673 Gene3D - 640 872 IPR027417 -
Sto8g0760 1673 CDD ABCC_MRP_domain1 645 844 - -
Sto8g0760 1673 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 334 611 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0760 1673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 641 866 IPR027417 -
Sto8g0760 1673 SUPERFAMILY ABC transporter transmembrane region 968 1268 IPR036640 GO:0005524|GO:0016021
Sto8g0760 1673 ProSitePatterns ABC transporters family signature. 769 783 IPR017871 GO:0005524
Sto8g0760 1673 Pfam ABC transporter 662 796 IPR003439 GO:0005524
Sto8g0760 1673 Pfam ABC transporter 1305 1453 IPR003439 GO:0005524
Sto8g0760 1673 Gene3D - 1271 1514 IPR027417 -
Sto8g0760 1673 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 88 1500 - -
Sto8g0760 1673 SMART AAA_5 1314 1506 IPR003593 -
Sto8g0760 1673 SMART AAA_5 671 852 IPR003593 -
Sto8g0760 1673 Pfam ABC transporter transmembrane region 335 599 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0760 1673 Pfam ABC transporter transmembrane region 971 1213 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0760 1673 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 88 1500 - -
Sto8g0760 1673 Gene3D ABC transporter type 1, transmembrane domain 299 628 IPR036640 GO:0005524|GO:0016021
Sto8g0760 1673 Gene3D ABC transporter type 1, transmembrane domain 930 1269 IPR036640 GO:0005524|GO:0016021
Sto8g0760 1673 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 971 1241 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0760 Sto-Chr8 4776793 4786691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0760 627 860 Calmodulin-binding Proteins AT2G36910 30.620 1.53e-20 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0760 - - cit:102609764 2536.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0760 8 4776793 4786691 Sto8g0760 8 4776793 4786691 ECH