Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0746 ATGGGGATGTCCGGAGCACTGTCTTCGTCCTTGCCTGTCCACCCAACTCCCCTAGAAGAGACATATCCCAAGTTGCCTGATTCTCAGCTGGCTTTTGTGGAGAAAGAGCCCATGGCAAGACCTATCACTCATTCAAGTCATATAAATTCCAGCGGAACAGTTGGGCATATGTATTCATCATCCCCTGGATATTTAACGGATCTTCATCATTCATCCCTTTCACCTCATGAAGAACAGTCGAGAAATGCCCATTTTATTTCACAGTCATCAAGTAGCATGGCATCATTGCCATTGTCATATTCTTCAAGTACTGGACCTCTTCCTTCTACAGCAAGCAATGCTTCTTGGGGTACAGATTCCTTCCCAAGCTTTCTTGATTTTCCTGTAAATACCTCCATTGAGAATAGTCAAGTAGAAAGCAGTGCCTGCAATATAATGGCATCTGAGGAGTATAGCAAGAGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATTAGTGATGATGACACTTTGGCTTCCAGTTGGAATGACATTCTTGCTGACACAAGCATTCATGATCTTGAGCCAAAGGTGGCATGCCAGGTTTCAAAATCATCTTCACAATTTTCAGGACAACAGTCCCAAGGTCATCGGCAACTACCTGCTTCATCAGGAGAAAATCGTGCTGGTGTTCCACCCTCTTCTTCAGCAAATTCTGCTCCTTCCAAGCCACGAATGCGGTGGACACCAGAGCTTCATGAGGTCTTTGTGGATGCTGTCAACAAACTGGGTGGGAGTGAAAGAGCAACCCCTAAGGGCGTGCTGAAGCTCATGAATGTTGAAGGCTTAACAATATATCATGTTAAAAGCCATTTGCAGAAATATAGGACTGCTAGATATAGACCGGAGTCATCTGAAGGATCCTCGGAGAAAAAATTAACTCCCATTGAAGAGATGTCATCTCTAGACTTGAAAACTGGTATTGAGATAACTGAAGCTCTGAGACTGCAGATGGAGGTCCAGAAGCGGCTGCATGAACAGCTTGAGATTCAACGGAATTTACAGTTGCGAATTGAAGAGCAAGGAAGGTACCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGCGTAGAAAAGTTTAAGGCAGCATCATCTACCATGGAGAGTCCCTCTAGAGTGCCATCAGATGCTATTAAAGATTCTTCTGCCAAAAGtgacaaggaaacctcccaagtgGACCATGGCAGAGCAGGAAGTGAGGTAGATAAAGGCATCTGCATCTCCACAGGCGAAGGAAGCTCACTGAAAGTGGGTGAGAAGCATAATGCTGGTGACAGTCCTAAGGAAGATGATGCTAGAGAAGATAATGACCATCCCTCTAAGCGTCAAAGGGCAGATGAATAG 1383 0.4418 MGMSGALSSSLPVHPTPLEETYPKLPDSQLAFVEKEPMARPITHSSHINSSGTVGHMYSSSPGYLTDLHHSSLSPHEEQSRNAHFISQSSSSMASLPLSYSSSTGPLPSTASNASWGTDSFPSFLDFPVNTSIENSQVESSACNIMASEEYSKRNDWQEWADQLISDDDTLASSWNDILADTSIHDLEPKVACQVSKSSSQFSGQQSQGHRQLPASSGENRAGVPPSSSANSAPSKPRMRWTPELHEVFVDAVNKLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRTARYRPESSEGSSEKKLTPIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEKFKAASSTMESPSRVPSDAIKDSSAKSDKETSQVDHGRAGSEVDKGICISTGEGSSLKVGEKHNAGDSPKEDDAREDNDHPSKRQRADE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0746 460 Pfam Myb-like DNA-binding domain 238 289 IPR001005 -
Sto8g0746 460 MobiDBLite consensus disorder prediction 434 460 - -
Sto8g0746 460 MobiDBLite consensus disorder prediction 1 15 - -
Sto8g0746 460 Pfam MYB-CC type transfactor, LHEQLE motif 321 368 IPR025756 -
Sto8g0746 460 SUPERFAMILY Homeodomain-like 234 290 IPR009057 -
Sto8g0746 460 MobiDBLite consensus disorder prediction 195 236 - -
Sto8g0746 460 MobiDBLite consensus disorder prediction 68 87 - -
Sto8g0746 460 MobiDBLite consensus disorder prediction 392 413 - -
Sto8g0746 460 MobiDBLite consensus disorder prediction 195 238 - -
Sto8g0746 460 Gene3D - 235 294 - -
Sto8g0746 460 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 460 IPR044848 GO:0003700
Sto8g0746 460 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 10 460 - -
Sto8g0746 460 MobiDBLite consensus disorder prediction 375 460 - -
Sto8g0746 460 MobiDBLite consensus disorder prediction 1 22 - -
Sto8g0746 460 MobiDBLite consensus disorder prediction 375 391 - -
Sto8g0746 460 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 233 293 IPR017930 -
Sto8g0746 460 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 236 290 IPR006447 GO:0003677
Sto8g0746 460 Coils Coil 324 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0746 Sto-Chr8 4708205 4712016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0746 8 401 G2-like Transcription Factor Family AT4G28610 50.246 2.19e-107 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto8g0746 Myb_DNA-binding 7.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0746 - - gmx:100810560 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0746 8 4708205 4712016 Sto13g3383 13 37104301 37107734 CCT
Sto8g0746 8 4708205 4712016 Sto8g0746 8 4708205 4712016 ECH
Sto8g0746 8 4708205 4712016 Sto13g3383 13 37104301 37107734 ECH