Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0737 ATGGTGAATAGAAtcagagagagaagaaggaggGGCGATTTGAGCAAGAGTTTGAGGAGGAAGATAATGAAGTGCATATGCTCAGGGGAGCTATTAAGAAGAGAAGATGAAATGGTTCCTTCATCCGAATCTCTTGCAACCAAGGATTATATAGTGAGTGGGGATTCTTGCCAACCTGAACAAGTTGACAAGAAGAAGCCAGATACTCGTAATATCGAAGAAGCCGAATCATCTCTTCGTGAGAGTGGTTTCTTGAACTATGAGGAAGCTAGAGCTCTGTTAGGAAGATATGAATTTCAGAAAGGAAACACTGAAGCTGCTTTGCATGTTTTTGAGGGAATAGATATAGGTGCTGTGACTCCTAAGATCAAAACTTCCCTAACTCAAAAGGTAGAACACCCTAAGAGACATAAGAGACGTTCCCATAATTATGCTGTACCTCCTATGTCTATACATGCTGTTGGCCTACTGTTGGAAGCTGTCCTCCTAAAAGCAAAATCATTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATACTGGACATAGTTGAATCTTCATTACCTGAAGGCTTGCCTGAAAACTTTGGTGCTGAATGTAAATTGCAGGAGACTCTGAGCAATGCAGTTGAATTGCTTCCAGAATTATGGAAACTTGCTGATTGTCATCATGAAGCTATTTTGTCTTACCGACGGGCACTACTTCATCAATGGAACCTTGATGCAGAGACCATAGCAAAGATTCAGAAAGAGTTTGTAGTTTTTCTTCTATATAGTGGGGGGGAAGCAAGCCCACCAAATCTCCGTTCCCAAATGGAAAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTTCTTTTGATGATCTTGCTAAGAAAAGTTTCTCTAAAGAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTTTCTGTTTCTGGGGATTTGACAACTTTAGCTAATCAATGGAAAGAATTGCTCCCCCGGACTGTCAGTCGAAGAGATAGGTATTTTACTCTAGCCCTCTGTTATTTTGGAGCTGGTCAGGAGTTGGTAGCACTGGATCTTCTCAGAAAGTTGTTGAGTAGTAAGGAGGACCCAAAACATGTTCCAGCTTTGTTAACGGCATCCAAGATATGTTTTGACAACCCCAATCTTGCAGAAGAAGGGAAAGTGTTGCCAATTGCTTACTTGGTATTTCGCTTCAGCCATTCAAAATTGGCCATTTCTGATTCTGAGAGGTTTGAGAGACAATCTGAGGCGCTTCGTGCCCTGGAGACTGCTGGCCAAATGACTAGAATGAGAGACCCCAATATATTATACCATTTAAGTTTAGAATATGCAGAACAAAGAAAGTTGGAGATTGCACTTTATTATGCTAAGCGCCTTCTAAAACTGGAAGCTGGGTCTAATGTTAAAGGGTGGCTTTTGTTAGCTCGAATATTATCAGCTCAAAAACGGTTTTTAGATGCTGAATCTATTGTTAGTGCTGCTTTGGATCAAACTGGGAAATGGGATCAAGGAGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCggagggtcagttaaagagtgcCATTGAGACATATACTCAGCTACTTGCtgtttttcaaattcaaaataaagCATTTGGTACTGGGAAGAAGCTATATAAGGAGAACAGAGATGATGCAAGGAAGTTGGAAGTGGAAATATGGCATGATCTTGCTTATGTATATATAAGCTTGTCACAGTGGCAAGATGCTGAGATTTGTCTTTCTAAATCTAAGGCCATCAAACTATACACTGCTTCTAGATGTCATGCAACAGGCAAGCTTTATGAAGCAAAGGGTCTTTATAAAGAGGCTTTAAGAGCCTTTGGTAATGCTTTGGACATTGATCCCAAGCATGTGCCAAGCTTGATTTGCAGTGCAGTGGTTCTGAGACAATGTGGTAGTAATGAATCAAATTGTGTGGCAAGAAGCTTTTTGATGGATGCATTACGTCATGATAGATTGAATGGTTGTGCATGGTATAATCTTGGCCTTCTTCACAAGGATGAAGAGTTGGAAATGGAAACCGAAGAAGATAGGCTTATATTGTTATCCAGGGGTGATGGGACCCACAGAAAGTTCCAAGTGGTGAAAATCACAGAAACAGATTTAGCAGCAGGATCGTCATCTTATTCTGTGATTGCTGCAAGAAATGTGAAATGCCTCAACCTCAACTTTTCAACGAGGCTTTTCAAGATGGCAATATGGAGCACAAACAAGAAGAAAGATGGTGATGAAAGCCTAAGTTCAGTGGACCATGGAACTGCAAGAGGAAATCCATTTGGTAACGCTCTCACTATCGGATAA 2370 0.397 MVNRIRERRRRGDLSKSLRRKIMKCICSGELLRREDEMVPSSESLATKDYIVSGDSCQPEQVDKKKPDTRNIEEAESSLRESGFLNYEEARALLGRYEFQKGNTEAALHVFEGIDIGAVTPKIKTSLTQKVEHPKRHKRRSHNYAVPPMSIHAVGLLLEAVLLKAKSLQALGRFKEAAQSCKVILDIVESSLPEGLPENFGAECKLQETLSNAVELLPELWKLADCHHEAILSYRRALLHQWNLDAETIAKIQKEFVVFLLYSGGEASPPNLRSQMESSFVPRNNIEEAILLLMILLRKVSLKRIEWDPSILDHLSFALSVSGDLTTLANQWKELLPRTVSRRDRYFTLALCYFGAGQELVALDLLRKLLSSKEDPKHVPALLTASKICFDNPNLAEEGKVLPIAYLVFRFSHSKLAISDSERFERQSEALRALETAGQMTRMRDPNILYHLSLEYAEQRKLEIALYYAKRLLKLEAGSNVKGWLLLARILSAQKRFLDAESIVSAALDQTGKWDQGDLLRTKAKLQIAEGQLKSAIETYTQLLAVFQIQNKAFGTGKKLYKENRDDARKLEVEIWHDLAYVYISLSQWQDAEICLSKSKAIKLYTASRCHATGKLYEAKGLYKEALRAFGNALDIDPKHVPSLICSAVVLRQCGSNESNCVARSFLMDALRHDRLNGCAWYNLGLLHKDEELEMETEEDRLILLSRGDGTHRKFQVVKITETDLAAGSSSYSVIAARNVKCLNLNFSTRLFKMAIWSTNKKKDGDESLSSVDHGTARGNPFGNALTIG 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0737 789 Pfam Tetratricopeptide repeat 610 640 IPR019734 GO:0005515
Sto8g0737 789 PANTHER PROTEIN NPGR2 13 697 - -
Sto8g0737 789 ProSiteProfiles TPR repeat profile. 607 640 IPR019734 GO:0005515
Sto8g0737 789 SUPERFAMILY TPR-like 345 597 IPR011990 GO:0005515
Sto8g0737 789 SMART tpr_5 517 550 IPR019734 GO:0005515
Sto8g0737 789 SMART tpr_5 481 514 IPR019734 GO:0005515
Sto8g0737 789 SMART tpr_5 607 640 IPR019734 GO:0005515
Sto8g0737 789 SMART tpr_5 446 479 IPR019734 GO:0005515
Sto8g0737 789 SMART tpr_5 158 191 IPR019734 GO:0005515
Sto8g0737 789 SMART tpr_5 573 606 IPR019734 GO:0005515
Sto8g0737 789 Gene3D Tetratricopeptide repeat domain 553 700 IPR011990 GO:0005515
Sto8g0737 789 Gene3D Tetratricopeptide repeat domain 68 552 IPR011990 GO:0005515
Sto8g0737 789 PANTHER PROTEIN NPG1 13 697 IPR043376 -
Sto8g0737 789 SUPERFAMILY TPR-like 518 688 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0737 Sto-Chr8 4664218 4670120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0737 14 691 Calmodulin-binding Proteins AT4G28600 56.799 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0737 K21843 - jre:108995987 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3388 13 37142074 37145061 Sto8g0737 8 4664218 4670120 CCT
Sto8g0737 8 4664218 4670120 Sto8g0737 8 4664218 4670120 ECH