Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0727 ATGGATCATGTGATTGCTGGGAAGTTTAAACTTGGAAGGAAGATTGGGAGTGGGTCTTTTGGGGAGCTGTATTTAGGCGCAAATGTACAAACTGGAGAGGAGGTGGCCGTTAAGCTGGAACCTGCGAAGACCAAGCATCCTCAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTCATGGTTATTGATCTTCTTGGACCAAGTCTGGAAGATTTGTTCAACTATTGCAACCGGAAGTTGACATTGAAGACTGTGTTGATGCTTGCTGATCAATTAATAAACAGAGTTGAATATATGCATTCAAGAGGTTTTCTTCACCGTGACATAAAACCTGACAATTTTCTTATGGGCCTAGGGCGTAAGGCAAACCAgGTGTACGCTATTGACTATGGCCTTGCCAAGAAGTTTAGGGATCTTCAGACTCATAAGCACATACCATACAGgGAAAACAAGAACCTCACGGGCACAGCTCGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGTAGAAGGGATGATCTGGAATCCCTTGGTTACGTTCTTATGTACTTCTTGAGAGGAAGtcTTCCTTGGCAGGGACTGAAGGCTGGAACCAAAAAGCAAAAATATGATAAGATCAGCGAGAAGAAGATGTCAACTCCCATAGAGGTGCTCTGCAAATCATATCCATCTGAGTTTGTATCATACTTCCACTACTGCCGATCATTGCGTTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGGCTTTTTCGTGACTTGTTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCACAGATTGGTTCTAGCTCTAGAGGACGGAATGGCAGTGGCAAAGCAGCCATGAATGCTGGACCATCTGTGCAAAAGCCAGAAAACATCTCAGCTGGGAAAGATACTCGAGAGAAATTCTCTGGTGCTGTTGAAGCACTCTCCAGGAGGAACCCCACAGGTTCAAGTCCTCTGGCTGATCAAACCAAACAGCGGATGTTTGAGGATGTACCATTACATAAAGATATGCACCATGAACAAGAGAAGGGACGGAGTTCTGCTCGATATGGGAGCAGCACAAGAAGAGCCATGGTGTCATCAAGCAAGCCAAGTTCCTCAGGTGATCACACTGATAGTCGTACTGGTCGGCTGACTCCAAGCAGTAGCCGCCCATCTACCACACGCCCTCTATATGAGAGCAAACAACCAACTTTTACTCGAAATGCATCTTCTAGAGGAAATCGTGATGATCCTCTTAGGAGCTTTGAGCTTCTCTCTATCAGGAAGTAA 1374 0.4418 MDHVIAGKFKLGRKIGSGSFGELYLGANVQTGEEVAVKLEPAKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKLTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKFRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRGRNGSGKAAMNAGPSVQKPENISAGKDTREKFSGAVEALSRRNPTGSSPLADQTKQRMFEDVPLHKDMHHEQEKGRSSARYGSSTRRAMVSSSKPSSSGDHTDSRTGRLTPSSSRPSTTRPLYESKQPTFTRNASSRGNRDDPLRSFELLSIRK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0727 457 MobiDBLite consensus disorder prediction 343 357 - -
Sto8g0727 457 MobiDBLite consensus disorder prediction 381 440 - -
Sto8g0727 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Sto8g0727 457 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0727 457 PANTHER CASEIN KINASE-RELATED 1 442 - -
Sto8g0727 457 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sto8g0727 457 MobiDBLite consensus disorder prediction 301 457 - -
Sto8g0727 457 MobiDBLite consensus disorder prediction 441 457 - -
Sto8g0727 457 Gene3D Transferase(Phosphotransferase) domain 1 1 339 - -
Sto8g0727 457 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0727 457 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 442 - -
Sto8g0727 457 MobiDBLite consensus disorder prediction 361 380 - -
Sto8g0727 457 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Sto8g0727 457 CDD STKc_CK1_delta_epsilon 8 282 - -
Sto8g0727 457 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0727 Sto-Chr8 4595026 4599107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0727 5 219 EF-hand Containing Proteins AT3G50530 27.092 2.03e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Sto8g0727 Pkinase 1.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0727 K08960 - gmx:100781494 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0727 8 4595026 4599107 Sto8g0727 8 4595026 4599107 ECH