Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0724 ATGAGTTCCAAGAAGGATATGGATTCTGCTCGGGGTTGGCTTCAAAAGTTTCAGCCAAGGGATAAAATGAGGAGTTCTACGAAGAAGAAGGACAGTGCTGGGGGAAATGAAGACTCGGATGCACCGTTGGATGAAGAAGCTCTATCCAATATCACGAAGCAGAAGGTTGCAGCAGCAAAGCAGTATATAGAGAACCATTACAAGGAGCAAATGAAGAGCCTTCAAGAGAGGAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGACCAAACAAACCTGTTTAAATTTTTGGAGAAAAAGGAAACTGAATACATGCGGCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGCTATTGACTATGATTGGCAAAGGTGCATTTGGGGAGGTTAGAGTCTGTCGGGAAAAGACGACTGGGCATGTATTTGCAATGAAAAAGCTAAAGAAATCGGAAATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAGGATGATGACTATCTGTACCTTATTATGGAGTATTTACCGGGTGGGGATATGATGACGTTACTTATGAGAAAAGATATCTTGACTGAAGATGAAGCTAGATTTTACGTAGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATCCATAGGGATATTAAGCCTGATAACTTGTTATTGGATAGATATGGACACTTGAGACTATCAGATTTTGGACTTTGTAAACCATTAGATTGCAGTATACTTCAAGAAGAGGACTTTTCTGTAGGTCAGAATGCAAATGATTCTACACAGAATTATGAACGTGTAGCTTCTTCAAATCGGACACAACAAGAACAATTACAACACTGGCAAAAGAACAGGAGGACACTTGCTTATTCTACTGTTGGTACGCCAGATTACATTGCTCCAGAAGTTCTGTTGAAGAAAGGTTATGGAATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTGGTAGGATATCCACCTTTTTATTCTGACGATCCAATGTCAACATGTAGGAAGATAGTAAACTGGAAAACTCACTTGAAATTTCCTGAAGAGGCAATGCTATCTCCTGAGGCTAAAGATTTGATCAGTAAACTTTTGTGTAATGTCAACCAGAGGCTGGGGTCAAAAGGTGCAGGTGAAATAAAGGCTCATCCTTTCTTCAAAGATACTGATTGGGATATGCTATACCAAATGGAAGCTGCATTTATTCCCGAGGTTAATGATGACTTGGATACtcaaaattttgagaagttTGAAGAGTCTGACAGCAACGTTCAACCATCATCAAGAAGTGGCCCATGGAGGAAGATGCTCTCATCTAAGGACATAAATTTTGTTGGATATACGTACAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGATATGCCTTTAATTGGTAcagCggaattgaaaatgaaaagttCCAAAGCTAAGAGGCCATCAATCAAGTCGCTCTTTGGTAAGCCTTTTGCTCTTTTTCTAAACCATTTTGttacttTGGGATTTGAGGTGGTTCATGGCAATTTGAACAACATAATCCGACCACCACATGTGCATGAATCCTGGGACTACCCAAATAATATTGTTGGCTTGTCATCATCAGCTCCAACGTTAACCCCATCATCAATCCCATTTTCAAGTCCAACCATTAATGACACCCACCACAATAACATACCACAGAACGAGCTTTCAGATTGGGTGGAGCATTTCACCAAACACCTTGTGGACGACATACCCACATCCGATAACTTGCTTCCCTATAACCACCACCAAACAAGTATCCCATTCCCCGCAAGAAAACCCACCATTAATGACCTCCAAATCCACAATATCCAAACAAGCCCTTCAGATTATACCcatacccaaacccaaacccaaaacaacgATGGCTTGAACCTCTTAACCCTCCTAATGGAATGTGCGGTGGCAATTTCTGTGGACAACCTATGTGAGGCACACAATATGCTACTCGAGCTAACCCAATTGGCCTCTCCCTATAAGCCATCCTGCGCCGAGCGAGTCGTATCGTACTTCGCTAAAGCCTTGGCTAGCCGAGTCATGAACTCATGGCTCGGCATTTTCTCACCTTTGATTGACCACAGAAGCATCCACTCCTCATTCCAAATCTTCAACAACATCTCCCCTTTCATCAAATTCGCCCATTTCACTTCCAACCAAGCCATCCTCGAAGCCGTACAATTCCACCGCTGCGCCGACGCCCTCCACATCATCGACCTCGACATCATGCAGGGCCTTCAATGGCCCGCCTTCTTCCACATCCTCGCCACCCGAATCGAGGGCCCGCCACGTGTCCGCATGACCGCCATCGGAGCCTCCATGGACCTCCTCCTCGACACAGGCAAACAGCTCACCAATTTCGCCAAACGCCTGGGAATGTCCTTCCACTTCCAACCAATCGCACGGAAATTCGGAGAAATCGAGGACGTCTCCTTCATCCGAGCCCGACCCGGCGAGACACTCGCCGTCCACTGGCTACAGCACTCGCTCTACGACGCAACGGGACCAGATTGGAAGACTCTGAGACTTCTCGAGGAATTAGAGCCAAGAATTGTGACTATAGTAGAACAAGACGTTTCAAACGGCGGGTCGTTTTTGGACCGTTTTGTTGGGTCGTTGCATTATTACTCTACTCTGTTTGATTCGGTTGGGGCATATATGAGCAGCGAGGACCCTAATAGGCATAAAGTTGAACATGGGCTTTTGGGTAGAGAGATCAATAATATATTGGCCATAGGAGGGCCTTCGAGAAGTGGAGAAGATAAGTATAGACAGTGGAGGAGTGAGCTCGGGAGGCATTGTAGTTTCGTGCAGGTGCCTATGAGCCCTAATTCGATGGCTCAAGCACAATTGATTCTCAACATGTTTTCGCCTGCTCATGGCTATACACTTGCCCAAGTCGATGGAATGTTGAGGCTTGGATGGAAGGACACTAGTTTATATACTGCTTCTGCATGGACATGTTGTccaaaactataa 3120 0.433 MSSKKDMDSARGWLQKFQPRDKMRSSTKKKDSAGGNEDSDAPLDEEALSNITKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQTNLFKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSILQEEDFSVGQNANDSTQNYERVASSNRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKTHLKFPEEAMLSPEAKDLISKLLCNVNQRLGSKGAGEIKAHPFFKDTDWDMLYQMEAAFIPEVNDDLDTQNFEKFEESDSNVQPSSRSGPWRKMLSSKDINFVGYTYKNFEIVNDYQVPGMDMPLIGTAELKMKSSKAKRPSIKSLFGKPFALFLNHFVTLGFEVVHGNLNNIIRPPHVHESWDYPNNIVGLSSSAPTLTPSSIPFSSPTINDTHHNNIPQNELSDWVEHFTKHLVDDIPTSDNLLPYNHHQTSIPFPARKPTINDLQIHNIQTSPSDYTHTQTQTQNNDGLNLLTLLMECAVAISVDNLCEAHNMLLELTQLASPYKPSCAERVVSYFAKALASRVMNSWLGIFSPLIDHRSIHSSFQIFNNISPFIKFAHFTSNQAILEAVQFHRCADALHIIDLDIMQGLQWPAFFHILATRIEGPPRVRMTAIGASMDLLLDTGKQLTNFAKRLGMSFHFQPIARKFGEIEDVSFIRARPGETLAVHWLQHSLYDATGPDWKTLRLLEELEPRIVTIVEQDVSNGGSFLDRFVGSLHYYSTLFDSVGAYMSSEDPNRHKVEHGLLGREINNILAIGGPSRSGEDKYRQWRSELGRHCSFVQVPMSPNSMAQAQLILNMFSPAHGYTLAQVDGMLRLGWKDTSLYTASAWTCCPKL 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0724 1039 MobiDBLite consensus disorder prediction 1 37 - -
Sto8g0724 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Sto8g0724 1039 SMART serkin_6 125 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0724 1039 SMART pkinase_C_6 425 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto8g0724 1039 Gene3D Transferase(Phosphotransferase) domain 1 209 442 - -
Sto8g0724 1039 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Sto8g0724 1039 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 41 534 - -
Sto8g0724 1039 ProSiteProfiles AGC-kinase C-terminal domain profile. 425 497 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto8g0724 1039 ProSiteProfiles Protein kinase domain profile. 125 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0724 1039 Pfam Protein kinase C terminal domain 443 487 IPR017892 GO:0004674|GO:0005524|GO:0006468
Sto8g0724 1039 ProSiteProfiles GRAS family profile. 665 1034 IPR005202 -
Sto8g0724 1039 SUPERFAMILY Protein kinase-like (PK-like) 102 479 IPR011009 -
Sto8g0724 1039 Gene3D Phosphorylase Kinase; domain 1 123 453 - -
Sto8g0724 1039 CDD STKc_NDR_like 123 488 - -
Sto8g0724 1039 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 534 - -
Sto8g0724 1039 Pfam Protein kinase domain 126 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0724 1039 Pfam GRAS domain family 675 1034 IPR005202 -
Sto8g0724 1039 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0724 Sto-Chr8 4562355 4573807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0724 7 541 AGC Kinase Gene Family AT2G20470 76.937 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Sto8g0724 GRAS 4.6e-100 CL0063
TF GRAS Sto8g0724 GRAS 4.6e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0724 K08790 - gmx:100820558 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3395 13 37175647 37191965 Sto8g0724 8 4562355 4573807 CCT
Sto8g0724 8 4562355 4573807 Sto8g0724 8 4562355 4573807 ECH