Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0715 CTGAACGCAAATGAATGGTACTTCTTCAGTTTCCGTGACCGCAAATACGCCACGGGGTTTCGGACCAATAGGGCGACGACATCTGGATATTGGAAAGCAACAGGGAAGGATCGTACGGTGGTGGATCCAATGACACGTGAGGTTGTAGGGATGAGGAAGACATTGGTGTTCTACAGGAACAGAGCTCCCAATGGCATCAAAACTGGTTGGATCATGCATGAGTTTCGCCTGGAGACCCCACATATGCCACCCAAGGAAGACTGGGTTTTGTGTAGAGTGTTTCACAAAAGCAAATCAGACATGAACAACGACAACCTTAACAACAGTAGTTCTACTGCCAAACTCATGATGTTCGAAGACACCTCTGATCATAATCCATCTTCGTCCATATTATTATCTCCTTCCCTAACTTTGGCTTCATCTTCTCCAACCAACcaacccattcccattcccattcctcaTGTTGGGTATAATAACCAactttcctcctcttcttcctcttcaatcCCATCCCTTAATtataatcatcatcatcttatGAATTTCCTTCAATTTTCTCGGGAATCAAACGCCGCCTGCAGCACTATTACTGATCACAATAATATTACTCCAACAAAAGGTGTTGGCGGTGATGATGATGGGTACGGATTCCTATGGGACATGGATCTCCAAGAAAATAGCGTCGACGCAATCAGATCGTTCGAGGTTGATAATAATAGTATGGTCTTGTTGTGA 735 0.4014 LNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPMTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKSDMNNDNLNNSSSTAKLMMFEDTSDHNPSSSILLSPSLTLASSSPTNQPIPIPIPHVGYNNQLSSSSSSSIPSLNYNHHHLMNFLQFSRESNAACSTITDHNNITPTKGVGGDDDGYGFLWDMDLQENSVDAIRSFEVDNNSMVLL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0715 244 ProSiteProfiles NAC domain profile. 1 96 IPR003441 GO:0003677|GO:0006355
Sto8g0715 244 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 237 - -
Sto8g0715 244 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 237 - -
Sto8g0715 244 Pfam No apical meristem (NAM) protein 3 77 IPR003441 GO:0003677|GO:0006355
Sto8g0715 244 Gene3D NAC domain 1 101 IPR036093 GO:0003677|GO:0006355
Sto8g0715 244 SUPERFAMILY NAC domain 2 96 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0715 Sto-Chr8 4503419 4504795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0715 1 130 NAC Transcription Factor Family AT1G56010 53.472 1.35e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g0715 NAM 3.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0715 - - gmx:100806284 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0715 8 4503419 4504795 Sto13g3402 13 37232395 37236291 CCT
Sto8g0715 8 4503419 4504795 Sto8g0715 8 4503419 4504795 ECH