Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0714 ATGCGAGAACGGGAAGCATGGGAGAGTGAAAGAAGCTGCTCTTACGAGGATCAGAGAAACATAATTATGGAatcaaaaaatagaagaaattatGCCAGAACTGAGAATGTGGGAAACCTTTCAGCTCCCCCTGGTTTTAAATCCCTTACTTCTTTCATGCTAAAAAGGGTTCAAAAGGCTGAAGAGGTTGATAAATCTGAACATGAGCCAATGTGCACGGAAACTATATCTGAGATGAATGACATTGCTGAATGTAAGTCAATTCTTAAGCATCATCGTCCATGGATACTTTTCAATCAAAGCAACCGTGACCCTGAGAAATCTGACACAGTGCATCTTCCTAAGGATCTTCCTTTAAAAGCTTGTCGTCCTAAAGGAGTTACATTTGGTTGTCCAGACTGCAGTGATTGTCTGAAGGTGACTGCAAGGTGGCACCCGGAGGATGCAAGAAGAGATATCTTAGATGAAGCTGGTATTTTCCACCCGACAGAAGAGGAATTTAAAGACACACTTAAATATATTACAAGCATACATTCCAAAGTAGAGCCTTATGGAATTTGTCGTATCATTCCTCCTGCTGATTGGAAACCACTATGTCGTCTTGTGGAAAAGGACATATGGGAAAGGTCCAAATTTGTTACCCAGATTCAGCGGATTGATGGACTCCAAGTTCAGTGCCAACAAGAAATAACAGCCAACGCTTTTGAAAATCTGAATATCAATAGCAGAAGAGATCTAAGAGTAACTTTGGGCTCTCAGCCTGGTCATGATATTATCAACTTTGAGTCTAAACCTGGTCCTACATTCAGTCTTAGTACATTTAAGAAATTTGCTGATGATTTTAAGGCCTTGTACTTCAACCTCGATGATAAGATCATGGATTCTGGTAAAAAGTGGGAGTCGTCTGTGGAGAATATTGAGGGTGAATATGGACGGATTGTTCAGAATCCAACTGAAGAAATTGAGGTTCTTTATGGTAAGAATTTGGAGGTTGGAGGTTTGAGTAGTGGATTTCCAACAATGTCTGATCCTCTGGAATCTCTCCATTATGAAAAATATGTGAAATGTGGATGGAACCTAAATAATATGCTTACACTTCCTggttctcttctttcttttgaaAGCTCTGAGATTTCACGCAAATTTTCCCCTCAAATTCACGTTGGAATGTGCTTTTCTTCATCCAACTGGAAAGTAGAAGAGAACCAGTTCTACTCATTGTATTACATGCACATGGGTGAACCTAGAGTGTGGTATAGCATCCCAAGAAGATTTGCTGCTGACTTCGAAGCTGTAAGGAAGAAGTATCTCCCAGTTTTGTTTGCAGACCAGTCCAACTTACATGATAATCTGGGGAAGCAGTTATCCTACACCATATTGAAGTCAGAGGGTATACCAGTATATCGCTGTGTTCAGTATCCTCGGGAGTTTGTTCTTATTCCCTCGGGAGCATATCATTCAGGATTTGATTGTGGTTTCAACTGTTCTGAAGCAGTCAGTTTTGCTCCTCTTGATTGGCTGTTTGATGGGCAGAATGTTGTAGAGATCTATTCTGAGCAAAGGAGAAAGACATCAATCTCATATGATAAGATATTGCTTGGAGCAGCGAGGAAAGCTGTTAGGTCacaatttgaaattgaattctgCAGGTTGAGCACCCCAGATAATATATCATGGAAAGAAGCCTGTGGAAGAAGTGGGCTCTTAAAAAAAGCTTTTGATTTGCGAATAAAGAGTGAAAGTTTAAAGAGGGAATTTCTCTGCACTTCTTTGAAATCAGAGAGAATGGACAAAGATTATGACCATGCCACTTGCAAAAGGGAATGCTGTATATGTCTGCGTGATTTACACTTATCTGCTGTAGGTTGTCCATGTTCAATGAACAAATTTGCATGTCTTAATCATGCAAAGCAGCTCTGTTCTTGTGCTTGGAGTGACAAATTGATCCTCTGCCAATATGAAATCAGTGAATTGAATACCCTTAGTCTTGCTTTGGAGGGACAATTAAAAGCAATTCTCAAATGGGCTAAAGATGATCTTGGATTAACTCTGTACTCTGTAGCGTCCAAAAGATGGAAACAGACTCCTCCAGGAAATGTGGGTGGTTCAACTTCAATTTCTACATCAGTAGCAAAAGCAGCAATATTGAATGCAGTGAAACGGAAAAGAGATGCAGTTGGGTCCAAAGGTACGACAGGCATTAATGATATTTCTTCTGCAACTGAAGCAAAATTGAAGACTCCTTTACCTCAATCGAGTGAGTTGAAAGCAAAACAGAAAACGGTGGGGCACCATTCTGCTGCAGCATGCATTAACAGAGGGATGAATTCTGCCTCTGGCATCAAACCTGGTAAGAAGGCACGAGCAGTTCGATCAGAAATTCCAAATTCGGTACAAAatgacccaaaacccaaagtgTCTTCGGTTAAAGGTCCAAGTTCAACCTCACGTTTTATGGCTTTTCTGTCAGAAAACATATGTGATGTTTCTTCAGATAGTTCATCTTCGTCTTCAGAATCGGATGATGACACTTGA 2535 0.3933 MREREAWESERSCSYEDQRNIIMESKNRRNYARTENVGNLSAPPGFKSLTSFMLKRVQKAEEVDKSEHEPMCTETISEMNDIAECKSILKHHRPWILFNQSNRDPEKSDTVHLPKDLPLKACRPKGVTFGCPDCSDCLKVTARWHPEDARRDILDEAGIFHPTEEEFKDTLKYITSIHSKVEPYGICRIIPPADWKPLCRLVEKDIWERSKFVTQIQRIDGLQVQCQQEITANAFENLNINSRRDLRVTLGSQPGHDIINFESKPGPTFSLSTFKKFADDFKALYFNLDDKIMDSGKKWESSVENIEGEYGRIVQNPTEEIEVLYGKNLEVGGLSSGFPTMSDPLESLHYEKYVKCGWNLNNMLTLPGSLLSFESSEISRKFSPQIHVGMCFSSSNWKVEENQFYSLYYMHMGEPRVWYSIPRRFAADFEAVRKKYLPVLFADQSNLHDNLGKQLSYTILKSEGIPVYRCVQYPREFVLIPSGAYHSGFDCGFNCSEAVSFAPLDWLFDGQNVVEIYSEQRRKTSISYDKILLGAARKAVRSQFEIEFCRLSTPDNISWKEACGRSGLLKKAFDLRIKSESLKREFLCTSLKSERMDKDYDHATCKRECCICLRDLHLSAVGCPCSMNKFACLNHAKQLCSCAWSDKLILCQYEISELNTLSLALEGQLKAILKWAKDDLGLTLYSVASKRWKQTPPGNVGGSTSISTSVAKAAILNAVKRKRDAVGSKGTTGINDISSATEAKLKTPLPQSSELKAKQKTVGHHSAAACINRGMNSASGIKPGKKARAVRSEIPNSVQNDPKPKVSSVKGPSSTSRFMAFLSENICDVSSDSSSSSSESDDDT 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0714 844 ProSiteProfiles JmjC domain profile. 355 518 IPR003347 -
Sto8g0714 844 PANTHER LYSINE-SPECIFIC DEMETHYLASE 106 778 - -
Sto8g0714 844 Pfam jmjN domain 159 191 IPR003349 -
Sto8g0714 844 SMART JmjN_1 156 197 IPR003349 -
Sto8g0714 844 MobiDBLite consensus disorder prediction 775 813 - -
Sto8g0714 844 SMART cupin_9 352 518 IPR003347 -
Sto8g0714 844 Gene3D Cupin 142 502 - -
Sto8g0714 844 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 106 778 - -
Sto8g0714 844 SUPERFAMILY Clavaminate synthase-like 266 540 - -
Sto8g0714 844 MobiDBLite consensus disorder prediction 793 813 - -
Sto8g0714 844 Pfam JmjC domain, hydroxylase 386 501 IPR003347 -
Sto8g0714 844 Pfam C5HC2 zinc finger 609 661 IPR004198 -
Sto8g0714 844 ProSiteProfiles JmjN domain profile. 157 198 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0714 Sto-Chr8 4492487 4498966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0714 41 689 JUMONJI Transcription Factor Family AT1G08620 45.081 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sto8g0714 JmjC 1.1e-29 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0714 - - gmx:100804864 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0714 8 4492487 4498966 Sto8g0714 8 4492487 4498966 ECH