Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0710 TTGATATTTAGATCCCTACAGTCACCTCCACCTACTTCAGTTTTGGCTAGTCTTCAGCACTATTTGCAGGAACTTAAATGTTTGAAGAAGGAGCCTGCCACAGGCTATATAGAAGAGGCACTGACATATCAAAGAGAAAGTATTGAACCTCGGaatgaaaatttaaagaatattaTTGAGTTACTTGGATTGAAATCAAACCTGGAACTCTTTAAAGAAAGTATTGCTGTGGAAAAGGAAAGATTAAGTGTAGAAGTCAATAAAAAGAAAGGGGAATTAGATGAAATTGATGAAATTGTGAATCTTGTCTGCAATATGAGAGACTATGCGATTAAAATTGAGTGCCCTGGAGGCAAAAGTGGTGTTTCAATTCCTTCATACTTCATCTGTCCTTTATCATTGGAACTCATGGCAGATCCTGTTATCGTGGCTTCAGGTCAAACATATGAGAGGCTGTCCATCCAAAAGTGGCTTGATCATGGGTTGACTGTTTGTCCCAAGACTCGTCAGAGACTTACTCATACAAATCTTATTCCAAATTATACTGTCAAAGCTATGATAGCAAATTGGTGTGAGGAAAACAATATCAAACCTCCTGATAACTCTGAGTCCAATAATGGAAATGCTGTTGAGAAGCAAAAGGGTGATATCTCTTCCAGATTAAGTGGAGAATCCAATGAATGCCAGAGCATAGAGATGGAAAATTTTGAGAAACAATCCCCTGCGCTTATGTATATTGATAGCAGAAGTGAGTCATTCTCAAGTTCTATTTCTAGTATGGATTATGCACCTCCAGTTTCAAAAGAAGCATCAGAGATATTAAATAAACAAGGAAATGTAAAGGAACTGGCTGGAGAAATCACAAATGGGTGTCCTGCTTCTCAAGCAAATAAAGAATCAGAtAGTAGTGATTCAAAAGTGCATTCCCTTCCTGTTTGCAATTTGGGATCTGATGAGTTGACCACCCCATCTTACGTCAATAAGTTGATTGAAGACCTTCGTAGTCAGTCCAATGAAGTGCAAACTAAGGCTGCAGAAGAATTGAGGCTTCTTTCAAAGCACAACATGGAAAACAGAATCATTATCGGGCAGTGTGGTGCTGTCACACCTTTACTTTCGCTACTATATTCAGAAGTGAAGATAACACAAGAACATGCTGTGACAGCATTGCTGAATTTGTCCATTAGTGAGGATAACAAGGCCTTGATTGTGGAAGCTGGAGCAATAGAACCGCTTATCCATGTTTTGAAAACAGGAAATGATGGAGCCAAGGAGAATTCAGCAGCAACTCTATTCAGCCTCTCTGTTATAGAAAACTATAAGGCAAAGATTGGACAATCTGGTGCGGTTAAAGCCTTGGTGGACCTTCTAGGTTTTGGAACTCTTAGAGGGAAGAAGGATGCTGCTACTGCTTTATTTAACCTATCAATATGTCATGAGAATAAAGCTCGCATAGTTCAAGCTGGAGCGGTGAAGCATCTGGTTCAGTTAATGGACCCTGCCACTGGAATGGTTGACAAGGCTGTTGCACTTCTGGCAAACTTGTCAACAATTGCAGAGGGCCGATTAGCAATTGCAAGGGAAGGGGGCATCCCCTTACTCGTTGATCTTGTTGATTCAGGCTCCCAAAGGGGAAAGGAAAATGCTGCATCTGTTCTCTTGCAACTATGCCTTCATAGTACCAAGTTTTGTACTCTGGTTCTGCAAGAAGGAGCTGTACCTCCCTTAGTTGCATTGTCTCAATCCGGTACACCCAGAGCAAAGGAAAAGGCACAACAGCTTCTCAGCCATTTTCGTAATCAGCGGGAAGGAGCTACCGGGAAGGGAAAAGcatga 1836 0.4074 LIFRSLQSPPPTSVLASLQHYLQELKCLKKEPATGYIEEALTYQRESIEPRNENLKNIIELLGLKSNLELFKESIAVEKERLSVEVNKKKGELDEIDEIVNLVCNMRDYAIKIECPGGKSGVSIPSYFICPLSLELMADPVIVASGQTYERLSIQKWLDHGLTVCPKTRQRLTHTNLIPNYTVKAMIANWCEENNIKPPDNSESNNGNAVEKQKGDISSRLSGESNECQSIEMENFEKQSPALMYIDSRSESFSSSISSMDYAPPVSKEASEILNKQGNVKELAGEITNGCPASQANKESDSSDSKVHSLPVCNLGSDELTTPSYVNKLIEDLRSQSNEVQTKAAEELRLLSKHNMENRIIIGQCGAVTPLLSLLYSEVKITQEHAVTALLNLSISEDNKALIVEAGAIEPLIHVLKTGNDGAKENSAATLFSLSVIENYKAKIGQSGAVKALVDLLGFGTLRGKKDAATALFNLSICHENKARIVQAGAVKHLVQLMDPATGMVDKAVALLANLSTIAEGRLAIAREGGIPLLVDLVDSGSQRGKENAASVLLQLCLHSTKFCTLVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRNQREGATGKGKA 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0710 611 SMART Ubox_2 127 190 IPR003613 GO:0004842|GO:0016567
Sto8g0710 611 Gene3D - 308 463 IPR011989 -
Sto8g0710 611 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 366 408 IPR000225 GO:0005515
Sto8g0710 611 MobiDBLite consensus disorder prediction 198 224 - -
Sto8g0710 611 SUPERFAMILY ARM repeat 321 598 IPR016024 -
Sto8g0710 611 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 2 231 - -
Sto8g0710 611 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 292 606 - -
Sto8g0710 611 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 123 197 IPR013083 -
Sto8g0710 611 CDD RING-Ubox_PUB 128 170 IPR045210 -
Sto8g0710 611 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 448 490 IPR000225 GO:0005515
Sto8g0710 611 SMART arm_5 355 395 IPR000225 GO:0005515
Sto8g0710 611 SMART arm_5 478 517 IPR000225 GO:0005515
Sto8g0710 611 SMART arm_5 437 477 IPR000225 GO:0005515
Sto8g0710 611 SMART arm_5 518 558 IPR000225 GO:0005515
Sto8g0710 611 SMART arm_5 396 436 IPR000225 GO:0005515
Sto8g0710 611 Pfam U-box domain 124 195 IPR003613 GO:0004842|GO:0016567
Sto8g0710 611 Gene3D - 465 607 IPR011989 -
Sto8g0710 611 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 489 530 IPR000225 GO:0005515
Sto8g0710 611 ProSiteProfiles U-box domain profile. 123 197 IPR003613 GO:0004842|GO:0016567
Sto8g0710 611 Pfam Armadillo/beta-catenin-like repeat 396 435 IPR000225 GO:0005515
Sto8g0710 611 Pfam Armadillo/beta-catenin-like repeat 520 557 IPR000225 GO:0005515
Sto8g0710 611 Pfam Armadillo/beta-catenin-like repeat 479 516 IPR000225 GO:0005515
Sto8g0710 611 Pfam Armadillo/beta-catenin-like repeat 357 394 IPR000225 GO:0005515
Sto8g0710 611 Pfam Armadillo/beta-catenin-like repeat 441 476 IPR000225 GO:0005515
Sto8g0710 611 PANTHER U BOX DOMAIN-CONTAINING 292 606 - -
Sto8g0710 611 PANTHER U BOX DOMAIN-CONTAINING 2 231 - -
Sto8g0710 611 SUPERFAMILY RING/U-box 122 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0710 Sto-Chr8 4459859 4462542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0710 7 611 U-box Gene Family AT3G54790 55.247 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0710 - - gmx:100804684 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0710 8 4459859 4462542 Sto8g0710 8 4459859 4462542 ECH