Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0703 atggtGAGAGCTCCTTGCTGCGAGAAAGTGGGATTGAAGAGAGGACCATGGACTCCAGAAGAAGACCATATACTCATCAATTATGTCAACAAATATGGACACACCAATTGGCGTGCCCTCCCCAAACAAGCTGGGCTTCTAAGGTGTGGAAAAAGTTGCAGACTCCGATGGATCAATTATTTGAAGCCAGACATCAAACGAGGAAACTTCACCCCGGAAGAAGAAGACACCATAATCAAGCTCCACCACATATGGTCAGCCATTGCAGCGAGATTACCGGGACGCACAGATAATGAAATAAAGAATGTGTGGCACACCCACTTGAAGAAGAGGCTCCCACAACACCAACAAAACAATCTccaaacaaaatcaaaatcaaaatcaaaacacAAGGACACCATCGTCCCACTCTCTCCTTCACACTCTTCTAGTGACATCTCCACCCTAACAACAACTGAGAACAGTAACACCAACACTACTATTAACGTTGAGTCCCCGGAGATGGCACTGGACGAGGATTTCTGGTCGGAAGTACTGTCATCAGCTGATACTTCTGATGAGACGACCACCCATACAGATAGAGGTGTTGATGAACAGTTTCAATTTCTATTCTCTCCGCTAGAAGAGACGCCCCAAGTAGACGAAGTACATCATGTTGGTTCATCCAACTTCAGCGGTGATGGCATGGATTTTTGGTACGATGTTTACACCAGAGCTGACCAATTATGGGATCTACCACAATTATGA 747 0.4378 MVRAPCCEKVGLKRGPWTPEEDHILINYVNKYGHTNWRALPKQAGLLRCGKSCRLRWINYLKPDIKRGNFTPEEEDTIIKLHHIWSAIAARLPGRTDNEIKNVWHTHLKKRLPQHQQNNLQTKSKSKSKHKDTIVPLSPSHSSSDISTLTTTENSNTNTTINVESPEMALDEDFWSEVLSSADTSDETTTHTDRGVDEQFQFLFSPLEETPQVDEVHHVGSSNFSGDGMDFWYDVYTRADQLWDLPQL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0703 248 MobiDBLite consensus disorder prediction 109 160 - -
Sto8g0703 248 MobiDBLite consensus disorder prediction 135 160 - -
Sto8g0703 248 ProSiteProfiles Myb-like domain profile. 62 108 IPR001005 -
Sto8g0703 248 PANTHER TRANSCRIPTION FACTOR MYB15 1 247 - -
Sto8g0703 248 CDD SANT 16 61 IPR001005 -
Sto8g0703 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 247 - -
Sto8g0703 248 Gene3D - 11 67 - -
Sto8g0703 248 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto8g0703 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sto8g0703 248 CDD SANT 69 108 IPR001005 -
Sto8g0703 248 Gene3D - 68 135 - -
Sto8g0703 248 SMART sant 66 110 IPR001005 -
Sto8g0703 248 SMART sant 13 63 IPR001005 -
Sto8g0703 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 112 IPR017930 -
Sto8g0703 248 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto8g0703 248 Pfam Myb-like DNA-binding domain 67 108 IPR001005 -
Sto8g0703 248 SUPERFAMILY Homeodomain-like 11 104 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0703 Sto-Chr8 4430458 4431922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0703 1 248 MYB Transcription Factor Family AT2G31180 48.855 9.42e-80 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto8g0703 Myb_DNA-binding 4.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0703 K09422 - csin:114277318 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0703 8 4430458 4431922 Sto8g0703 8 4430458 4431922 ECH