Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0699 ATGTCTTCCCATTTCTTTCAACATCCATATCCATGCCCAGATAATTGGGACTTGTGGCAGGGGCCATCTGATATCATGGAGCCTTTGTCAAGCAGCCTAGTTCATGACCATGAACATGAACATGACCATGATGCTCTTTCCTTCGACATGGCGGACTGTATAATTGATCCGCAGCCACCGGCAGCGAAGAGTGAAGGCACACAAGAGAAGGAGAAATCATACATCGGAGTCAGGAAGAGGCCATGGGGAAAATTTGCGGCGGAGATCAGAGATACGACCAGGAATGGGGCGAGGGTTTGGCTGGGAACGTTCGAGAGCGCAGAGGCGGCTGCTTTAGCTTATGACCAAGCTGCATTTACCATGAGAGGCCCCACTGCTATTCTTAATTTTCCGGCGGAAAGGGTGAGGGAGTCACTGCAAGACATCAACTATGCTTGCCGCAAAGGCTGTTCTCCCGCTTTAGCCCTCAAAGAGAGACACTGCTTACAAAGAAAATTGTCATCAAAGTCCAGAAAAGGTAAAGACAAGCAGAAATCAGAGGCAAGTGCAAGTGCAAGTGCAAGCAATGTGGTCGTACTAGAGGATTTGGGAGTTGAATATCTAGACCAACTTCTCAGCATGTCCCATCAAACACCAAGCCCTATCCACTTCAAGAACAAACCCACAAATATTGATTCTCCCCTCCGCCTGAGACATGgaagacaaaaacaaaatatgttTGAAGTAGTATTTGCTAGTGCAGGAAAAGGATTAATTAAGTACAAAATTGAAGCAATAAAAGCAGAGTTGGTATACTTGATGAACTGGAAAGGAATTGGCTTATCATGA 828 0.4517 MSSHFFQHPYPCPDNWDLWQGPSDIMEPLSSSLVHDHEHEHDHDALSFDMADCIIDPQPPAAKSEGTQEKEKSYIGVRKRPWGKFAAEIRDTTRNGARVWLGTFESAEAAALAYDQAAFTMRGPTAILNFPAERVRESLQDINYACRKGCSPALALKERHCLQRKLSSKSRKGKDKQKSEASASASASNVVVLEDLGVEYLDQLLSMSHQTPSPIHFKNKPTNIDSPLRLRHGRQKQNMFEVVFASAGKGLIKYKIEAIKAELVYLMNWKGIGLS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0699 275 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Sto8g0699 275 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Sto8g0699 275 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 67 207 - -
Sto8g0699 275 SMART rav1_2 73 137 IPR001471 GO:0003700|GO:0006355
Sto8g0699 275 ProSiteProfiles AP2/ERF domain profile. 73 131 IPR001471 GO:0003700|GO:0006355
Sto8g0699 275 CDD AP2 72 132 IPR001471 GO:0003700|GO:0006355
Sto8g0699 275 Pfam AP2 domain 73 123 IPR001471 GO:0003700|GO:0006355
Sto8g0699 275 Gene3D AP2/ERF domain 72 132 IPR036955 GO:0003700|GO:0006355
Sto8g0699 275 SUPERFAMILY DNA-binding domain 73 132 IPR016177 GO:0003677
Sto8g0699 275 PANTHER DNA-BINDING DOMAIN 67 207 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0699 Sto-Chr8 4391039 4392479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0699 56 211 AP2-EREBP Transcription Factor Family AT3G23240 58.333 1.83e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto8g0699 AP2 7.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0699 K14516 - gmx:100527364 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0699 8 4391039 4392479 Sto13g3418 13 37312380 37317120 CCT
Sto8g0699 8 4391039 4392479 Sto8g0699 8 4391039 4392479 ECH