Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0698 ATGTCTTCCCCTTTCTTTCAGCATCCGTGCCCAGATTGGGAGGAGCCCTACGATATTCTCTTTGAATCTTCAAGCATCCATGTCCATGAAGATCCTATCCATGATTATCTTTCCTTCGACATGGTGGACAGTATGACTGAGCCACCACCAGTAACCACGGAGGCAAAGTCACCGGCGGAGAAGTCAGAATTAGGCAAGAGTAGCAGTAGTAAGGAGATGATGAGAGCATACATAGGGGTGAGGAAGAGACCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACAACCAGGAATGGAGTGAGGGTTTGGCTGGGAACATTTGAGAGTGCAGAGGCGGCTGCTTTAGCTTATGACCAAGCTGCATTTACCATGAGAGGCCCCACTGCTGTTCTCAATTTTCCGGTGGAAAGGGTGAGGGAGTCTCTGCAGGAGATCAAGTATGGTTGCCGCCAAGGGTGTTCGCCTGCTTTGGCACTCAAAGAGAGGCACTGCATCAAAAGAAGATTAATGTCATCAAAGGCAAGGAAAGGCAAAGAGAAGCAGAAATCAGACGTGGTGGTGTTAGAGGACTTGGGAGTTGAATATCTAGAGCAACTTCTCAGCATGTCCCTTCAAACTGCTAGCCCTACCTACAAACCCATGGGAAATCTTCCTTCAGATGTTGAGTAA 669 0.4813 MSSPFFQHPCPDWEEPYDILFESSSIHVHEDPIHDYLSFDMVDSMTEPPPVTTEAKSPAEKSELGKSSSSKEMMRAYIGVRKRPWGKFAAEIRDTTRNGVRVWLGTFESAEAAALAYDQAAFTMRGPTAVLNFPVERVRESLQEIKYGCRQGCSPALALKERHCIKRRLMSSKARKGKEKQKSDVVVLEDLGVEYLEQLLSMSLQTASPTYKPMGNLPSDVE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0698 222 MobiDBLite consensus disorder prediction 47 70 - -
Sto8g0698 222 SUPERFAMILY DNA-binding domain 76 136 IPR016177 GO:0003677
Sto8g0698 222 SMART rav1_2 76 140 IPR001471 GO:0003700|GO:0006355
Sto8g0698 222 Pfam AP2 domain 77 126 IPR001471 GO:0003700|GO:0006355
Sto8g0698 222 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 34 202 - -
Sto8g0698 222 Gene3D AP2/ERF domain 75 136 IPR036955 GO:0003700|GO:0006355
Sto8g0698 222 ProSiteProfiles AP2/ERF domain profile. 76 134 IPR001471 GO:0003700|GO:0006355
Sto8g0698 222 PANTHER DNA-BINDING DOMAIN 34 202 IPR044808 GO:0003700|GO:0009873
Sto8g0698 222 CDD AP2 77 135 IPR001471 GO:0003700|GO:0006355
Sto8g0698 222 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Sto8g0698 222 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0698 Sto-Chr8 4373520 4374423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0698 66 208 AP2-EREBP Transcription Factor Family AT3G23240 59.184 1.01e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto8g0698 AP2 6.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0698 K14516 - gmx:100811486 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0698 8 4373520 4374423 Sto13g3421 13 37337463 37338200 CCT
Sto8g0698 8 4373520 4374423 Sto8g0698 8 4373520 4374423 ECH