Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0697 ATGGAAAGATCAGGTGGGAATAAGGGgaaattaggagagagagaaaataggtaCAGAGGGATTAGAAAGAGGCCGTGGGGTAAGTTCGCTGCAGAAATAAGAGACCCAAATCGGAATGGAATGCGTGTTTGGCTTGGAACATTTGACACTGCGGAGGATGCTGCTAGGGCTTATGACGCTGCTGCTTTTCGTTTCAGGGGTCATAAGGCCATTCTCAACTTCCCTAAtcactttcatcatcatcatcatattaatCTAATCTctttctcatcatcatcatcttcatcatcttcagctTCAGCTTCACCTTCAGGTGGTCCTTTGGAGCTACAATGCTTGGATAACAAGTTGTTGGAGGATCTTCTTGATCACCCACAACCACCATTTCATCCCCATAACACTAATACTTAA 411 0.3625 MERSGGNKGKLGERENRYRGIRKRPWGKFAAEIRDPNRNGMRVWLGTFDTAEDAARAYDAAAFRFRGHKAILNFPNHFHHHHHINLISFSSSSSSSSSASASPSGGPLELQCLDNKLLEDLLDHPQPPFHPHNTNT 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0697 136 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
Sto8g0697 136 Gene3D AP2/ERF domain 16 76 IPR036955 GO:0003700|GO:0006355
Sto8g0697 136 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Sto8g0697 136 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Sto8g0697 136 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Sto8g0697 136 PANTHER DNA-BINDING DOMAIN 17 99 IPR044808 GO:0003700|GO:0009873
Sto8g0697 136 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 17 99 - -
Sto8g0697 136 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Sto8g0697 136 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Sto8g0697 136 MobiDBLite consensus disorder prediction 89 110 - -
Sto8g0697 136 MobiDBLite consensus disorder prediction 89 105 - -
Sto8g0697 136 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0697 Sto-Chr8 4360596 4361006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0697 13 123 AP2-EREBP Transcription Factor Family AT3G23230 53.782 6.57e-36 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto8g0697 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0697 - - vun:114173094 107.842