Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0696 ATGGAAGCCGTATCCGATAATTTGTCTTCCAACAGTATCCCCTCATGGTTGCGCAACATAACGGCAGACGAAGCTTTGAGACATTTAAGCTCACTGCCACCATCGATAGTGGATGGGCTGGGCTGGGCGTGCCTACAAGACCCTCATCCTCAAACCTCTGTTTTCTTGTTATGGGGAAGAGGAGTACGGAGGCGGCCATGGGGGAAGTTCGCAGCAGAGATTCGAGATTCGAATAGGCATGGAGTTCGCATGTGGCTTGGGACATTTAACACTGCAGAGGAAGCAGCGAGAGCTTATGATCGTGCTGCTTTTGAAATGAGAGGCAATTCAGCCATTCTCAACTTCCCAGAAGAATATGGTTTATTAGGCAATGTTGTGggaagtagtagtagtagtcacccctcttcctcttcctcttcctcttcccagCGTGTTggtaatcaagtttttgaattcCAGTGTTTGGATGACAAGTTATTAGAGGAACTTCTTGATTACGATCAGGATGCCATCAAGAAGGACTAG 525 0.4114 MEAVSDNLSSNSIPSWLRNITADEALRHLSSLPPSIVDGLGWACLQDPHPQTSVFLLWGRGVRRRPWGKFAAEIRDSNRHGVRMWLGTFNTAEEAARAYDRAAFEMRGNSAILNFPEEYGLLGNVVGSSSSSHPSSSSSSSSQRVGNQVFEFQCLDDKLLEELLDYDQDAIKKD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0696 174 CDD AP2 60 117 IPR001471 GO:0003700|GO:0006355
Sto8g0696 174 SUPERFAMILY DNA-binding domain 60 117 IPR016177 GO:0003677
Sto8g0696 174 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Sto8g0696 174 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Sto8g0696 174 PANTHER OS09G0571700 PROTEIN 54 168 - -
Sto8g0696 174 Gene3D AP2/ERF domain 60 117 IPR036955 GO:0003700|GO:0006355
Sto8g0696 174 ProSiteProfiles AP2/ERF domain profile. 58 116 IPR001471 GO:0003700|GO:0006355
Sto8g0696 174 Pfam AP2 domain 60 108 IPR001471 GO:0003700|GO:0006355
Sto8g0696 174 PANTHER DNA-BINDING DOMAIN 54 168 IPR044808 GO:0003700|GO:0009873
Sto8g0696 174 SMART rav1_2 60 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0696 Sto-Chr8 4356882 4358346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0696 60 165 AP2-EREBP Transcription Factor Family AT3G23230 63.717 7.90e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto8g0696 AP2 4.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0696 - - fve:101292013 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0696 8 4356882 4358346 Sto8g0696 8 4356882 4358346 ECH