Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0688 ATGACTGGTTCTGGTTCTCCCTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGGGGTTGTGTTTTTGCACCATACTTTTGTCATGAACAAGGTGCTACTCATTTTGCAGCCATTCATAAGGTATTTGGAGCAAGCAATGTGTCTAAGCTTCTTGCTCATCTTCCTGTGAGTGATCGTTGTGAAGCTGCCCTCACCATCTCTTATGAAGCTCAAGCCAGGCTTCAGGATCCTATTTATGGCTGTGTTTCCCATATTTTTGCACTCCAACAAcaggtggtgAATTTACAAGCTCAGCTGGCTTATCTGAAGGAACAAGCAGGTCAGAGCAATATTAATGTGAATGCCTCTGCTATGAGTGAAAACCCTAATGGAAAAGCTGCTTTCTGTGACCATGATCTTCAAAAATGGTTCCTTGAGGCAGAAAATCCAAACATGGGGATGCAGTGGAATGGGATTAATGAGATGGATGTAAAACCTACTGCAGTTGCAACTGGGAATTATGAAAATCATCCAGAAAGTATCTCAATTTCAAGCTTTCATCAGGAGACATGTAACTCCTATTCCTCCTATGATCATGACATGCAATTTACAGCAGCAAACAGCACGCCGTGGGGGTTTCATCATCATGAAGTGGATGATCTTCAATCAGTGGCTTTTGGTTACAGTGGATATTCTTCATCAGCTTCATGA 696 0.4167 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAALTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAGQSNINVNASAMSENPNGKAAFCDHDLQKWFLEAENPNMGMQWNGINEMDVKPTAVATGNYENHPESISISSFHQETCNSYSSYDHDMQFTAANSTPWGFHHHEVDDLQSVAFGYSGYSSSAS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0688 231 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Sto8g0688 231 Coils Coil 87 107 - -
Sto8g0688 231 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Sto8g0688 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 224 - -
Sto8g0688 231 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0688 Sto-Chr8 4296961 4297754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0688 7 125 AS2 family AT3G58190 84.034 1.47e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto8g0688 LOB 8.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0688 K13945 - gmx:100776678 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0688 8 4296961 4297754 Sto8g0688 8 4296961 4297754 ECH