Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0677 ATGGCCGTTGACGCGCTTCAACTTCGAAGAGACTCTCTCTCCGATCCTCCTCCGCCGCCGCCCAAGGCCGTCCGATTTGGTCCCGCCGTCCCCAAGGAGGCGCATTTCAGAGGCGTTCGCAAGCGTCCTTGGGGCCGATTCGCTGCCGAGATCCGCGATCCCTGGAAGAAGACGCGCAAGTGGCTTGGCACCTTCGACACCGCAGAGGAAGCCGCCAGGGCCTACGATGAGGCTGCTAGGAGTCTCCGCGGGCCCAGGGCTAAGACCAACTTCGTCTACGGCGCTCCGTCGAATCCTCTGCCGCCGTCCGTGGTGGATACTGGTGGTGACAGCGGTGAGATGTTTGGGAGGCGCATGGAGTTTTGGAGGGCGCCGGTGTATTACGCGACGGAGGTTCCGGCGGGAGTGCCGATGAGATCGGAGTACAAGGGATACAAGTTGGAGAATGTGGATTTGGTGGGTTTTCTGATTCTGAGATGTGGAAGAAAATGGCTTAtgcaagaaaaggaaaaaagtagAATAGTAGATGGCAACTGA 537 0.5698 MAVDALQLRRDSLSDPPPPPPKAVRFGPAVPKEAHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDEAARSLRGPRAKTNFVYGAPSNPLPPSVVDTGGDSGEMFGRRMEFWRAPVYYATEVPAGVPMRSEYKGYKLENVDLVGFLILRCGRKWLMQEKEKSRIVDGN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0677 178 CDD AP2 34 91 IPR001471 GO:0003700|GO:0006355
Sto8g0677 178 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Sto8g0677 178 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Sto8g0677 178 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Sto8g0677 178 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 30 99 - -
Sto8g0677 178 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Sto8g0677 178 MobiDBLite consensus disorder prediction 1 27 - -
Sto8g0677 178 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 30 99 - -
Sto8g0677 178 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
Sto8g0677 178 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Sto8g0677 178 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0677 Sto-Chr8 4210469 4211358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0677 32 117 AP2-EREBP Transcription Factor Family AT5G44210 65.909 2.16e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto8g0677 AP2 3.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0677 K09286 - zju:107425904 181.03