Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0676 ATGGCTGAAGAATCTAGGGTTTTGTCTTCTTTACCTTTTAGACAGACAGAGGTTAGTATGGAAGAGGTTGAAGAAGCCAATAGAGCAGCTGTTGAAAGCTGTCATAAAGTTCTAAGCTTGTTGTCTCAGCCACAAGATCAGGTTCAGTATAGGAACTTAATGGTGGAAACTGGGGAAGCCGTGGGAAAGTTCAAGAAAGTTGTTTCTCTGCTCAATAATGGGGTGGGTCATGCAAGAGTCAGGAAGGTCAAAAGACTTCAAATCCCTTTTCCCCAAAGCATCCTCTTAGACAACCCAAATTGTAAAACAAACTATCAATCAAAGAATTTGCAGTTTCCCCAAATTAGCTTTAGAGATGAGTCAATTCAGGAATTGAGAAATTCACTCTCCCTGGGAAACCCATCTTTGGAATTGAGCTCAAATGGGAAAAGTCCTTTCCACCTTAACCAACAAGCATCTTCACAGCATTTTCGCTACCAGCAGCAGATGCAACAACATAGGTTATTGCTACAGCAGCAACAACAGATGAAACACCAAGCAGAAATTATGTTTCGAAGGAACAATAGTGGCATAAATCTCAATTTTGATAGCTCTAGCTGCACACCAACAATGTCATCAACTAGGTCTTTTATATCTTCCTTGAGCATAGATGGAAGCGTAGCTAACGGGGATGGAAGTGCCTTCCATTTAGTAGGAGCTCCTCCACACTCTTCAGATCAGAATTCACTACAACACAAAAGAAAGTGTTCCAGCAGAGGAGATGAAGGCAGCGTGAAATGTGGGAGCAGTGCTAGATGCCATTGCTCAAAGAAAAGGAAACATAGAGTGAAGAGATCAATTAAGGTTCCCGCTATCAGCAACAAGCTTGCAGATATACCCCCTGACGATTATTCATGGAGAAAGTATGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTTGAGAGATGCCTGGAAGACCCTTCCATGCTAATCGTTACCTACGAAGGCGAGCATAACCACCCTAAAATACCAACACAATCTGCAAATGCATGA 1086 0.4319 MAEESRVLSSLPFRQTEVSMEEVEEANRAAVESCHKVLSLLSQPQDQVQYRNLMVETGEAVGKFKKVVSLLNNGVGHARVRKVKRLQIPFPQSILLDNPNCKTNYQSKNLQFPQISFRDESIQELRNSLSLGNPSLELSSNGKSPFHLNQQASSQHFRYQQQMQQHRLLLQQQQQMKHQAEIMFRRNNSGINLNFDSSSCTPTMSSTRSFISSLSIDGSVANGDGSAFHLVGAPPHSSDQNSLQHKRKCSSRGDEGSVKCGSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKIPTQSANA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0676 361 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 21 360 - -
Sto8g0676 361 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 360 IPR044810 GO:0003700
Sto8g0676 361 Pfam Plant zinc cluster domain 246 291 IPR018872 -
Sto8g0676 361 MobiDBLite consensus disorder prediction 227 256 - -
Sto8g0676 361 ProSiteProfiles WRKY domain profile. 288 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0676 361 SUPERFAMILY WRKY DNA-binding domain 291 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0676 361 SMART WRKY_cls 293 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0676 361 Pfam WRKY DNA -binding domain 295 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0676 361 Gene3D WRKY domain 278 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0676 Sto-Chr8 4205844 4208150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0676 20 361 WRKY Transcription Factor Family AT5G28650 50.704 5.82e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto8g0676 WRKY 1.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0676 - - gmx:100170681 561.222