Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0674 ATGGAGAATCAAGTGGTTAAAGTGAAGAGGGAAACGATTACAGCATGCATGACTTGCCCACTCTGCAATGACCTCTTCAACGAGGCCACCACTATAACTGAATGTCTTCATACGTTGCGTGTTTTAGCTGAAAATTTTCCTCCGAGAAGTCTACTTAGCTTTCTTGCATTTTCGAAGTGCATATATGACAAAATTACAGATGAGGAATTAGAATGCTGTCCGGTTTGCAATATTGATTTGGGCTGTGTTCCAATCGAGAAATTGAGGCCAGACCACAATTTGCAAGATCTCAGGGCTAAAATTTTCCCTCTGAAGACATGTAAGCTGAAGGCACCAGAAGTTGTCCCCTCTGTAACACAACCAGCTAGAAGAAAGGAAAGATCACTTTCCTCTTTGGTTGTCAGCACTCCCAGAGTATCAACACAGGCAACTATGACAGGCAGAAGAACAAAGCCCACAAGAAAGGCCAGTGCTGCACGCTCCTCTAGTTTCTCCATTGAGAAACCTATCATCAAAGAGGAAGATTCAGTGGAAGAGCCTCAGGAGAATTCAAGCTCACCTGATACCTCCAACAAGTTTACTCAGAGCACTGGACAGAGCTTGTCCCCTCCTGATGCAAGCCAGTCTGCACCCAATAAGGAAACAGACAATGGGGCAGAAGAAGCAAAGGATCTTTGGAAACCTCTAAATTGTTTGGTAGAGGTTGCAAGTAGGAGTAAATCCTTCAAGTCTAACATGCAAGGAAGTGATGCTAAACTAGAACCTGCACAAGTAAACGAGAATGACTCTCAAGTGCAAAAATCCAAAATTAAGGAGAATAGACGGAAGGCAAAAGTTGAAGAGGAGAAGACTGGCACAGATCCTGTTTCTTCAGATACAGCAAAAGCTAATAAGTCACGCAGAAATCGCAAGAAGAAGGAACCTGTATCGGGTGAATCAGGCATTTCACCCCAAGCTGTACTGGATGCAAACAGTGCTAGATTGAGCACAAGAACTGGTCCAATATGGTTCTCCTTGATAGCTTCTGATGATCAGTTACTGCTTCAGGGAAGGAGATGCACCATTACCCCAAGTTTCTGCAAATTATTTAAGGATAAACTTTCAGCTTATGCAGACATCTTCTTGTTCATGGTGGAGATCAAATGTATGGGACAACCTGTGGACCCTACTCTGCTACTTAATAATTTGATTGACTTGTGGCTGCAAACATCATCCCCGTCACAGCGATTTTCTGCAACTGTTGGATCCTCGGCTAAGGATTTTGTTATGGTCCTAAACTATGCTCGCAAGGCCCCACCCGCTTGA 1305 0.4375 MENQVVKVKRETITACMTCPLCNDLFNEATTITECLHTLRVLAENFPPRSLLSFLAFSKCIYDKITDEELECCPVCNIDLGCVPIEKLRPDHNLQDLRAKIFPLKTCKLKAPEVVPSVTQPARRKERSLSSLVVSTPRVSTQATMTGRRTKPTRKASAARSSSFSIEKPIIKEEDSVEEPQENSSSPDTSNKFTQSTGQSLSPPDASQSAPNKETDNGAEEAKDLWKPLNCLVEVASRSKSFKSNMQGSDAKLEPAQVNENDSQVQKSKIKENRRKAKVEEEKTGTDPVSSDTAKANKSRRNRKKKEPVSGESGISPQAVLDANSARLSTRTGPIWFSLIASDDQLLLQGRRCTITPSFCKLFKDKLSAYADIFLFMVEIKCMGQPVDPTLLLNNLIDLWLQTSSPSQRFSATVGSSAKDFVMVLNYARKAPPA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0674 434 MobiDBLite consensus disorder prediction 116 223 - -
Sto8g0674 434 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 2 430 IPR044807 GO:0004842
Sto8g0674 434 MobiDBLite consensus disorder prediction 123 164 - -
Sto8g0674 434 MobiDBLite consensus disorder prediction 241 317 - -
Sto8g0674 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 129 IPR013083 -
Sto8g0674 434 MobiDBLite consensus disorder prediction 241 264 - -
Sto8g0674 434 MobiDBLite consensus disorder prediction 265 288 - -
Sto8g0674 434 MobiDBLite consensus disorder prediction 182 215 - -
Sto8g0674 434 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 2 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0674 Sto-Chr8 4186982 4191433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0674 3 345 C3H Transcription Factor Family AT2G30580 47.110 1.86e-87 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0674 K16277 - gmx:100793731 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0674 8 4186982 4191433 Sto13g3455 13 37579353 37584271 CCT