Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0665 ATGAGCGGCATGGAAGTGAAGAAGATGGGTTACGAAGAAACAGAGCTGAGGCTgggattaggattaggattggGATATTTGGGTGCAGGAAATGAAGCAGCTGAAGTGGTGAGGAAGAGAGGCTTTTCTCAGACAGAAACACAAGACACAGACACAGTGGACTTGATGCTCAATCTCTCctccaaatccaaatccaagGAACCACATCCTCCTCCTATTTCTTTGCCAAAGGACAACACTCTTCTTCCCAACGATCCTGCCAACCCTCCTGCCAAggCGCAAGTGGTGGGATGGCCACCAGTGAGATCGTTCCGAAAGAACATAATAAAGAAGAGCGagaaggatgAGAAAGGAAGCCCTAACGGTAACGGAATGAGCTTGGTGAAAGTAAGCATGGATGGAGCTCCATACCTACGCAAAGTCGATCTCTCCCTCTACAACTCTTACCACCATCTCTGTGATGCCTTAGCCAAATTGTTCACCTCCTACACCaataGCAACTGTGGATCCCAAGGGATGAAGGATTTCATGAACGAGAGTAAGCTCATGAATCTTATAAACACCTCTGACTATGTCCCTACCTATGAAGACAAGGATGGAGACTGGATGCTTGTGGGTGATGTCCCATGGGACATGTTTGTGGAATCTTGCAAGCGTTTGCGTATCATGAAAGCCAAGGAGGCTATTGGACTTGCTCCAAGAGCCATGGAGAAATGCAAGAACAGAAGTTAG 732 0.4399 MSGMEVKKMGYEETELRLGLGLGLGYLGAGNEAAEVVRKRGFSQTETQDTDTVDLMLNLSSKSKSKEPHPPPISLPKDNTLLPNDPANPPAKAQVVGWPPVRSFRKNIIKKSEKDEKGSPNGNGMSLVKVSMDGAPYLRKVDLSLYNSYHHLCDALAKLFTSYTNSNCGSQGMKDFMNESKLMNLINTSDYVPTYEDKDGDWMLVGDVPWDMFVESCKRLRIMKAKEAIGLAPRAMEKCKNRS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0665 243 ProSiteProfiles PB1 domain profile. 125 227 IPR000270 GO:0005515
Sto8g0665 243 MobiDBLite consensus disorder prediction 62 95 - -
Sto8g0665 243 Gene3D - 121 237 - -
Sto8g0665 243 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 236 IPR003311 GO:0005634|GO:0006355
Sto8g0665 243 PANTHER AUXIN-INDUCED PROTEIN AUX28 6 236 - -
Sto8g0665 243 Pfam AUX/IAA family 36 234 IPR033389 -
Sto8g0665 243 SUPERFAMILY CAD & PB1 domains 121 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0665 Sto-Chr8 4142277 4143829 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0665 112 233 B3 DNA Binding Superfamily AT4G23980 30.328 1.81e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sto8g0665 AUX_IAA 2.6e-74 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0665 K14484 - zju:107425884 305.834