Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0663 CTGGGCCGTCCATTTGTGGTCCAGGGTTTTGAATACCATTGGTTGGTTGTGGCTGTGCCTCTTCCTCCCTTCCTTGTCCCCTCTGCCTTAGACAATCAACTCTTTCATGTCCCTCCTGTCTGCGGCAATCATATCTGTCGCTTCGAAATCCCGCCACGCGCTTTCCTCTGTCGTGGGGGCAGATCTGGAAGTGGATTTGCGGGTGAGGAAGCGCGTGTGAAAGGAGGAAggtggGCTTCTGAAGATGAGAAAGAGCAAGAGCAAGAGCAAGACAATAATACTAGTAGTACGACACCTCCACCTGCAAAGGTACAAGTAGTGGGATGGCCACCCATCCGATCATACAGGAAGAATGTAAAAGTagaagaaaagaagggaagaTGGTCATCAGGGGAAATAGAGGGAGAAGGGAGTGGGATGTATGTGAAAGTGAGCATGGATGGTGCACCTTACTTACGCAAGATAGATCTCAAGGTTTACAACTCCTACCCACAACTCCTCAACGCCTTGCAAATTATGTTCAACTGCACTTTCGGTGAATATTCAGAAAGGGAAGGGTACAATGGATCTGAACATGCTCCTACATATGAAGACAAGGATGGGGACTGGATGCTGGTTGGAGATGTTCCTTGGAATATGTTCATGTCGTCCTGCAAGAGGCTGAGAATCATGAAAGGATCTGAAGCTAAGGGTTTGGGTTGTTTATAA 708 0.4633 LGRPFVVQGFEYHWLVVAVPLPPFLVPSALDNQLFHVPPVCGNHICRFEIPPRAFLCRGGRSGSGFAGEEARVKGGRWASEDEKEQEQEQDNNTSSTTPPPAKVQVVGWPPIRSYRKNVKVEEKKGRWSSGEIEGEGSGMYVKVSMDGAPYLRKIDLKVYNSYPQLLNALQIMFNCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIMKGSEAKGLGCL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0663 235 SUPERFAMILY CAD & PB1 domains 134 225 - -
Sto8g0663 235 ProSiteProfiles PB1 domain profile. 139 226 IPR000270 GO:0005515
Sto8g0663 235 PANTHER AUXIN-INDUCED PROTEIN 80 233 - -
Sto8g0663 235 Pfam AUX/IAA family 82 233 IPR033389 -
Sto8g0663 235 MobiDBLite consensus disorder prediction 64 105 - -
Sto8g0663 235 Gene3D - 134 235 - -
Sto8g0663 235 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 80 233 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0663 Sto-Chr8 4131955 4133420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0663 142 232 B3 DNA Binding Superfamily AT2G46530 37.363 7.06e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sto8g0663 AUX_IAA 6.8e-59 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0663 K14484 - gmx:100799875 237.269