Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0661 ATGACATGGGAGATGGGACCAAGATTAATTGGACAAACCTCTTTAATTTCCTGCAAAAGAGATTCAACCTTATCACTAACTGAGGCTCGAGCTCCAGTGACCCCAACTGAACTCACCTATATTTCAAATCAAGAAATGATTCATGTATCAAATGTTTCACCGGCAGAATATAACCTGAGTAACTCAGAACAGAAGTGCCACCAAAGCGGAAAAAGCTTTCAAACCTGGATAACAGGACCATCTGCCAAAGGATCAGAGTATGGAACACCTAGCTCAATTATGTCAGAACCACATGAATCAAGCACTTTCAATGCTTCGGCTGTGGTTGAAAGATCGGGATCACCAGCTGTGATGCCTACAGTTTTTGTGGTTCTGAGAGCAGCCATTGGAGTGTATCTTCTTACTGGTATGATAGGTTTCTTCGAGGGAAAAACAGCCTGGAAATTGATCTCATGTTTCTTCAATTGCAAGAAACTAGTTGATTTCAGGGCAATAGCCATAAAAATGGGTAGTCTGCCACTGAGTGATTTCACACAGATAGGAATTGGTTCCTCAACACGTTTCCCAAACTCGTCTCCACTCGACTCGCCCGAGTCCCAACTCATGGCAAATAATCCTTCCGACACCCCCGCCGATGACTTCCTCGAACAAATCCTTGGATTCCCAACTTTCGCTTCCGCCGACTCCGGCTTGCCCGGTACGGCTTCTCATCCTCCGATGATGCTGCAGCTCAACTCCGGCGACGGTACCGACCACCTCGCCGCTGTCGGCGCTGGTGGCGGAAGTGGTGGTTTTCATGCACCAGTGTATCAGTTAGGCTTGAGCTTGGAGCAAGGGAAAGGAGGGTTTCTCAAGCCTGAGGAGGCTTCTGGGAGTGGGAAGCGGTTTCGTGACGATATCGTTGATGGTAGAGCCAAGAATGTTTTTCATGGTCAACCCATGCCTACTACCATTCCTACTGCTCCACAACCACCGGCAATGCGTCCAAGAGTGCGGGCTAGAAGAGGACAGGCTACAGATCCACATAGTATAGCAGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGAATCAGGGCTTTGCAGGAACTTGTTCCTAGTGTCAATAAGACAGATAGAGCTGTCATGCTAGATGAAATTGTGGATTATGTCAAGTTCTTGAGGCTTCAAGTGAAGGTAGATGCTCCCATGCTCCTTGTGAATGCTACATTTATTTCAAATGTCTACACTGATCTTCATGTTATCCAAAACTcctga 1254 0.4657 MTWEMGPRLIGQTSLISCKRDSTLSLTEARAPVTPTELTYISNQEMIHVSNVSPAEYNLSNSEQKCHQSGKSFQTWITGPSAKGSEYGTPSSIMSEPHESSTFNASAVVERSGSPAVMPTVFVVLRAAIGVYLLTGMIGFFEGKTAWKLISCFFNCKKLVDFRAIAIKMGSLPLSDFTQIGIGSSTRFPNSSPLDSPESQLMANNPSDTPADDFLEQILGFPTFASADSGLPGTASHPPMMLQLNSGDGTDHLAAVGAGGGSGGFHAPVYQLGLSLEQGKGGFLKPEEASGSGKRFRDDIVDGRAKNVFHGQPMPTTIPTAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVDAPMLLVNATFISNVYTDLHVIQNS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0661 417 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 207 393 - -
Sto8g0661 417 MobiDBLite consensus disorder prediction 188 207 - -
Sto8g0661 417 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 207 393 - -
Sto8g0661 417 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 335 393 IPR036638 GO:0046983
Sto8g0661 417 MobiDBLite consensus disorder prediction 307 327 - -
Sto8g0661 417 SMART finulus 343 392 IPR011598 GO:0046983
Sto8g0661 417 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Sto8g0661 417 Pfam Helix-loop-helix DNA-binding domain 342 386 IPR011598 GO:0046983
Sto8g0661 417 Gene3D - 332 393 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0661 Sto-Chr8 4114432 4122960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0661 202 392 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 60.577 5.74e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto8g0661 HLH 4.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0661 - - ccaj:109808880 280.026