Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0644 ATGAATTATCTGTACACAGTGAAAGAAGAGTACTTGGAAGATGAATCTTCATGTGAAGTCCCTTCTCCACAGCCAATGGAAGGACTTCATGACATAGGACCACCCCCATTCCTCACCAAGACATTCGATGTGGTGGACGACCCAACCACCGACCACATGATATCATGGACCATAGGCGGAACAAGCTTTGTGGTTTGGGATCCACATTCCTTCTCCACCAATCTCCTACCTAGATACTTCAAGCACAACAATTTTTCAAGCTTTGTCAGGCAATTAAACACCTATGGTTTTAGGAAAATTGATCCAGATAGATGGGAGTTTGCAAATGAAGGATTTCTGAGGGGGCACAGGCATCTATTGAGGAACATAAGGAGAAGGAAAGCACAATCTCATCAGTCTCAGGCTACTTCACCACAAGTATTAGAGCATTGTGTTGAATTAGGAAGGTTTGGGGTTGATGAAGAAATTGGTCGGTTGAGGAGGGACAAGCAAGTGTTGATGATGGAGATTGTGAAGCTTAGGCAGCAGCAACAGAATACAAGAGCCTATCTTCAGGCGATGGAGAAGAGGTTACGAGGCACAGAAATGAAGCAGCAACAAATGATGGCTTTCTTAGCTAGAGCTATGAAAAACCCAGCTTTTCTCAGCCAATTAATCCAacagaagaagagaaaagagcTGGAAGAAGCCATGAGTAAAAAGAGGAGAAGGCCAATTGAGCAAGGATCAAGTGGTGTTGCTGTTAAAGTTGAGAAACATGGGTTCCAAGTGTCAGAGCTTCAAGTGTTAGCAATGGAAATGCAGGGTATGGGTAGGGGGAGAACAGAGTATGAGGCACCGGAAGCATCATCAGAGAGGGTGGATAAAGAAGAACTTGATGAAGGGTTCTGGGAAGAACTATTTAGTGATAACTTTGAGGGTGAATTGGAGATTCCAAGTGaagatgaagatgtgaatgtGTTAGCCAATGGCATAGGTTACATGGGTTCTTCAAGTCCTAGGTTGCAAGCCAGGAGGTGCTTGGACAAGAATCTGTTCCTTGGTGGTAGCGTTAGCCATCATTATTTATCTCAAGATTTTTCAGAAGCGGTAGAACTCATGGAAGAAGTAGCTGAAGTGCAAGAAATGAAAGTTAATGAATGTTGCTTCTGA 1152 0.4219 MNYLYTVKEEYLEDESSCEVPSPQPMEGLHDIGPPPFLTKTFDVVDDPTTDHMISWTIGGTSFVVWDPHSFSTNLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFLRGHRHLLRNIRRRKAQSHQSQATSPQVLEHCVELGRFGVDEEIGRLRRDKQVLMMEIVKLRQQQQNTRAYLQAMEKRLRGTEMKQQQMMAFLARAMKNPAFLSQLIQQKKRKELEEAMSKKRRRPIEQGSSGVAVKVEKHGFQVSELQVLAMEMQGMGRGRTEYEAPEASSERVDKEELDEGFWEELFSDNFEGELEIPSEDEDVNVLANGIGYMGSSSPRLQARRCLDKNLFLGGSVSHHYLSQDFSEAVELMEEVAEVQEMKVNECCF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0644 383 SUPERFAMILY "Winged helix" DNA-binding domain 33 126 IPR036390 -
Sto8g0644 383 Pfam HSF-type DNA-binding 37 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g0644 383 ProSitePatterns HSF-type DNA-binding domain signature. 76 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g0644 383 Coils Coil 156 176 - -
Sto8g0644 383 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 11 317 - -
Sto8g0644 383 PRINTS Heat shock factor (HSF) domain signature 37 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g0644 383 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g0644 383 PRINTS Heat shock factor (HSF) domain signature 88 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g0644 383 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 317 IPR027725 -
Sto8g0644 383 SMART hsfneu3 33 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g0644 383 Gene3D - 30 127 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0644 Sto-Chr8 3961291 3962743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0644 23 332 HSF AT3G22830 49.722 7.26e-119 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Sto8g0644 HSF_DNA-bind 1.4e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0644 K09419 - gmx:100794264 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0644 8 3961291 3962743 Sto13g3492 13 37809166 37810816 CCT