LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g0633	ATGGAGCAGTATGAAATTCTAGAACAGATTGGCAAAGGTTCCTTTGGTTCTGCTCTGCTTGTGAGGCACAAGCATGAAAGGAAAAGGTATGTCCTCAAGAAGATCCGCCTTGCCCGCCAAACTGATAGAACTCGTAGATCTGCCCACCAGGAGATGGAGCTCATCTCTAAAGTAAAAAATCCATTTATAGTTGAATATAAAGATTCCTGGGTGGAAAAGGGTTGTTTTGTATGCATCATCATAGGCTATTGTGAAGGAGGAGacatGGCTGAAGCTGTTAAAAAGGCTAATGGTGTTCATTTTCCTGAAGAGAAGCTTTGTAAATGGCTTGTTCAACTCCTGATGGCGATTGATTACTTGCATGCAAACCATATCCTTCATCGTGATGTCAAGTGTTCAAATATTTTCTTGACCAAAGATCAAGATATACGACTAGGTGATTTTGGTCTGGCTAAATTGTTGACTTCCGATGACCTTGCTTCTTCGGTTGTTGGGACTCCAAGTTACATGTGCCCTGAGCTTCTTGCTGATATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGTTGCTGTATATATGAAATGGCTGCGCACAAGCCAGCTTTCAAAGCTTTTGATATGCAAgctttaattaacaaaataaacaaGTCAATAGTGGCTCCACTTCCAACCATGTATTCTGGTGCTTTTCGAGGGCTTGTCAAAAGCATGCTAAGGAAAAATCCAGAGCTTAGACCGAGTGCTGCAGAGTTACTAAATCATCCGCATCTTCAGCCTTACATTCTCAAAATTCACCTAAAACTAAATAGCCCCAGAAGAAGTACCTTTCCATTTCAGTGGCCTGACTCAAACTATGTTAGGAGAAGTCGGTTTGTGGTGCCAGACTCTGTTTCTACCCTTTCTGATAGAGATAAACGCTTGTCATTCAGCAATGACAGGGCCTTGACTCCTAGTATTTCTGGAACTGAAAAAGATTCTCAGTGTTCTACTCAAAATGCACATGGattttccatttgttcaaaggAGAAATTCTATGAACTATCTGTTGGCTGTGTCCGTGAAGAAAGCATAACTAACAAGTCAAAATCTACAAAGTTCTCAACTGTTGATAGTAGTACCCCAAGATTGAGAGCATCTAAGGGTTCTGGCACCCCCAGAAGGCAGACTACTCCATCAAAAATATTTCATACTGGTTCAAAGCGTGATTCACTTCCTGTATCTCATAATCCAGCCGGAAATTCTTCCCCACTGTCACGTAGAGCATCTCTTCCTCTTCCTACTGCCAAAGTTGGTCTCCTCCGGAGTGTGGAATCTCCAGATGTTTCTGTTAATAAACCGCGAATTGACAAGATTGCAGAATTTCCCCTTGCTTCTTCTGAGGATCCTGTCTTCCCCGTCCCCAGAAAGTCAACATCTGCCCAGTGCTTTTCTAGTTCACCAGTGGGTGCTGACTGCTCAATCACTAAGGACAAGTGCACAGTCCAGGTTGTAGACAAAGCCATGGCAGCCCCTGACAGTGTGAATGATGTTTGTCCTGAAACTCCAGGATATGGAAGTGAATGCTCAGGCCATGTCACAACTGGTGTTTCAAGCCGTTCTTCTACAGAGTTGCAGAACCGTAGGTTTGACACCTCATCTTACCAGCAACGTGCTGAGGCATTGGAGGGCTTGCTTGAATTTAGTGCAAGGCTCTTGCAGCAACAGAGGTTTGAAGAACTTGGGGTGTTGTTGAAGCCCTTTGGACCTGAGAAGGTTTCTCCAAGAGAAACTGCTATTTGGTTGACGAAGAGCTTTAAAGAAACTGTTGTGTAA	1815	0.4264	MEQYEILEQIGKGSFGSALLVRHKHERKRYVLKKIRLARQTDRTRRSAHQEMELISKVKNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAEAVKKANGVHFPEEKLCKWLVQLLMAIDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKLLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKAFDMQALINKINKSIVAPLPTMYSGAFRGLVKSMLRKNPELRPSAAELLNHPHLQPYILKIHLKLNSPRRSTFPFQWPDSNYVRRSRFVVPDSVSTLSDRDKRLSFSNDRALTPSISGTEKDSQCSTQNAHGFSICSKEKFYELSVGCVREESITNKSKSTKFSTVDSSTPRLRASKGSGTPRRQTTPSKIFHTGSKRDSLPVSHNPAGNSSPLSRRASLPLPTAKVGLLRSVESPDVSVNKPRIDKIAEFPLASSEDPVFPVPRKSTSAQCFSSSPVGADCSITKDKCTVQVVDKAMAAPDSVNDVCPETPGYGSECSGHVTTGVSSRSSTELQNRRFDTSSYQQRAEALEGLLEFSARLLQQQRFEELGVLLKPFGPEKVSPRETAIWLTKSFKETVV	604

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Sto8g0633	604	ProSiteProfiles	Protein kinase domain profile.	4	258	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Sto8g0633	604	SUPERFAMILY	Protein kinase-like (PK-like)	1	315	IPR011009	-
Sto8g0633	604	CDD	STKc_Nek	3	258	-	-
Sto8g0633	604	PANTHER	SERINE/THREONINE-KINASE NEK4	1	593	-	-
Sto8g0633	604	MobiDBLite	consensus disorder prediction	363	422	-	-
Sto8g0633	604	ProSitePatterns	Protein kinases ATP-binding region signature.	10	33	IPR017441	GO:0005524
Sto8g0633	604	Gene3D	Transferase(Phosphotransferase) domain 1	84	271	-	-
Sto8g0633	604	Gene3D	Phosphorylase Kinase; domain 1	1	83	-	-
Sto8g0633	604	Pfam	Protein kinase domain	4	257	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Sto8g0633	604	MobiDBLite	consensus disorder prediction	522	542	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g0633	Sto-Chr8	3906587	3910505	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g0633	10	259	MAP Kinase Kinase Kinase	AT1G53570	31.373	4.79e-37	143

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NEK	Sto8g0633		Pkinase	1.7e-63	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g0633	K08857		-	gmx:100810347	968.378

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g0633	8	3906587	3910505	Sto8g0633	8	3906587	3910505	ECH

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