Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0633 ATGGAGCAGTATGAAATTCTAGAACAGATTGGCAAAGGTTCCTTTGGTTCTGCTCTGCTTGTGAGGCACAAGCATGAAAGGAAAAGGTATGTCCTCAAGAAGATCCGCCTTGCCCGCCAAACTGATAGAACTCGTAGATCTGCCCACCAGGAGATGGAGCTCATCTCTAAAGTAAAAAATCCATTTATAGTTGAATATAAAGATTCCTGGGTGGAAAAGGGTTGTTTTGTATGCATCATCATAGGCTATTGTGAAGGAGGAGacatGGCTGAAGCTGTTAAAAAGGCTAATGGTGTTCATTTTCCTGAAGAGAAGCTTTGTAAATGGCTTGTTCAACTCCTGATGGCGATTGATTACTTGCATGCAAACCATATCCTTCATCGTGATGTCAAGTGTTCAAATATTTTCTTGACCAAAGATCAAGATATACGACTAGGTGATTTTGGTCTGGCTAAATTGTTGACTTCCGATGACCTTGCTTCTTCGGTTGTTGGGACTCCAAGTTACATGTGCCCTGAGCTTCTTGCTGATATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGTTGCTGTATATATGAAATGGCTGCGCACAAGCCAGCTTTCAAAGCTTTTGATATGCAAgctttaattaacaaaataaacaaGTCAATAGTGGCTCCACTTCCAACCATGTATTCTGGTGCTTTTCGAGGGCTTGTCAAAAGCATGCTAAGGAAAAATCCAGAGCTTAGACCGAGTGCTGCAGAGTTACTAAATCATCCGCATCTTCAGCCTTACATTCTCAAAATTCACCTAAAACTAAATAGCCCCAGAAGAAGTACCTTTCCATTTCAGTGGCCTGACTCAAACTATGTTAGGAGAAGTCGGTTTGTGGTGCCAGACTCTGTTTCTACCCTTTCTGATAGAGATAAACGCTTGTCATTCAGCAATGACAGGGCCTTGACTCCTAGTATTTCTGGAACTGAAAAAGATTCTCAGTGTTCTACTCAAAATGCACATGGattttccatttgttcaaaggAGAAATTCTATGAACTATCTGTTGGCTGTGTCCGTGAAGAAAGCATAACTAACAAGTCAAAATCTACAAAGTTCTCAACTGTTGATAGTAGTACCCCAAGATTGAGAGCATCTAAGGGTTCTGGCACCCCCAGAAGGCAGACTACTCCATCAAAAATATTTCATACTGGTTCAAAGCGTGATTCACTTCCTGTATCTCATAATCCAGCCGGAAATTCTTCCCCACTGTCACGTAGAGCATCTCTTCCTCTTCCTACTGCCAAAGTTGGTCTCCTCCGGAGTGTGGAATCTCCAGATGTTTCTGTTAATAAACCGCGAATTGACAAGATTGCAGAATTTCCCCTTGCTTCTTCTGAGGATCCTGTCTTCCCCGTCCCCAGAAAGTCAACATCTGCCCAGTGCTTTTCTAGTTCACCAGTGGGTGCTGACTGCTCAATCACTAAGGACAAGTGCACAGTCCAGGTTGTAGACAAAGCCATGGCAGCCCCTGACAGTGTGAATGATGTTTGTCCTGAAACTCCAGGATATGGAAGTGAATGCTCAGGCCATGTCACAACTGGTGTTTCAAGCCGTTCTTCTACAGAGTTGCAGAACCGTAGGTTTGACACCTCATCTTACCAGCAACGTGCTGAGGCATTGGAGGGCTTGCTTGAATTTAGTGCAAGGCTCTTGCAGCAACAGAGGTTTGAAGAACTTGGGGTGTTGTTGAAGCCCTTTGGACCTGAGAAGGTTTCTCCAAGAGAAACTGCTATTTGGTTGACGAAGAGCTTTAAAGAAACTGTTGTGTAA 1815 0.4264 MEQYEILEQIGKGSFGSALLVRHKHERKRYVLKKIRLARQTDRTRRSAHQEMELISKVKNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAEAVKKANGVHFPEEKLCKWLVQLLMAIDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKLLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKAFDMQALINKINKSIVAPLPTMYSGAFRGLVKSMLRKNPELRPSAAELLNHPHLQPYILKIHLKLNSPRRSTFPFQWPDSNYVRRSRFVVPDSVSTLSDRDKRLSFSNDRALTPSISGTEKDSQCSTQNAHGFSICSKEKFYELSVGCVREESITNKSKSTKFSTVDSSTPRLRASKGSGTPRRQTTPSKIFHTGSKRDSLPVSHNPAGNSSPLSRRASLPLPTAKVGLLRSVESPDVSVNKPRIDKIAEFPLASSEDPVFPVPRKSTSAQCFSSSPVGADCSITKDKCTVQVVDKAMAAPDSVNDVCPETPGYGSECSGHVTTGVSSRSSTELQNRRFDTSSYQQRAEALEGLLEFSARLLQQQRFEELGVLLKPFGPEKVSPRETAIWLTKSFKETVV 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0633 604 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0633 604 SUPERFAMILY Protein kinase-like (PK-like) 1 315 IPR011009 -
Sto8g0633 604 CDD STKc_Nek 3 258 - -
Sto8g0633 604 PANTHER SERINE/THREONINE-KINASE NEK4 1 593 - -
Sto8g0633 604 MobiDBLite consensus disorder prediction 363 422 - -
Sto8g0633 604 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Sto8g0633 604 Gene3D Transferase(Phosphotransferase) domain 1 84 271 - -
Sto8g0633 604 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Sto8g0633 604 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0633 604 MobiDBLite consensus disorder prediction 522 542 - -
Sto8g0633 604 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0633 604 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 593 - -
Sto8g0633 604 MobiDBLite consensus disorder prediction 363 423 - -
Sto8g0633 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0633 Sto-Chr8 3906587 3910505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0633 10 259 MAP Kinase Kinase Kinase AT1G53570 31.373 4.79e-37 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Sto8g0633 Pkinase 1.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0633 K08857 - gmx:100810347 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0633 8 3906587 3910505 Sto8g0633 8 3906587 3910505 ECH