Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0585 ATGATTGTTCACTTTCTTGTGCGTTCAGAGTCAATTTCTGTCACTGAGGCAATAAATAAATTTGCTTGGGCACGTGATCCTGGAATTTACAAGCAGGATTATATTGATGCACTATACATGTTTTATCACGAAAGGAaacctgaagaagttgtttgtCCTCAAACCCCAGAATGGAAGAGACTTTCTGATCCTGATTTCCATGGTGCAGCTGTCCCAACAATAGAAAATTGTGGAGATGTTCTTCCGCATGAGAATATCATGAGAAATGAAGTATTGACAAACGATGATGTTTTGGGAGATCCTGTACCTTCACATCAACTCTATACAATGCGACAAGAATGTTACCAACTGCTTAAGATGGGCAAAGGGGGAAGAGGACCTTTGCAGTTTCCTGGATCACATCCTGTTTCCCTCAACAGGGACAATCTACAACTCTTAAGACAGCGGTATTACTATGCCACATGGAAAGCTGATGGGACACGATATATGATGCTCATCACTTGCGATGGATGTTACTTGATTGACAGGAAATTTCATTTCCGAAAGGTCTATATGCGGTTtccttgcaaatatataaatgggGGTACGCCTGAAAGGAATCATCACTACACATTACTTGATGGTGAGATGATAATTGACATGGATCCACATACACAAAAGCAGGAGAGAAGATACCTTATTTATGATCTGATGGCTATTAATCAAGTTTCTGTGACTGAGCTGCCTTTCTATGAGCGGTGGAAATTGCTAGAGAAAGAAGTGATTGAACCTCGTAACATGGAACGTGAGGCCCTTTGCAAGAGTATAAATCCTTATTATCGATATGACCTAGAACCATTTAGTGTGAGGAGGAAGGGCTTTTGGTTACTTTCTACTGTTTCAAAGCTTCTCAATAAATTCATTCCACAACTCTCACATCCATCAGATGGTCTTGTATTCCAGGGTTGGGATGATCCATATGTCCCTCGCACACATGAAGGTCTTCTGAAGTGGAAATACCCTGAAATGAACTCAGTTGATTTCCTCTTTGAGTTGGGAGCTGGTGAACGTCGACTGCTTTTTCTGCATGAACGTGGAAAGAAGAAATTAATGGAAGGGAGTAGGGTTGTTTTCAAAGACGTAGAGGATATATCTTCCTATTCAGGGAAAATCGTTGAATGCTCCTGGGACCCTGAGGAGAATCATTGGATCTGTATGCGGACTAGGATCGACAAATCAACTCCAAATGAGATGAACACCTATAGAAAGGTAATGCGAAGCATTAAGGATAATATTACAGAGGAAGTTGTGTTGAAGGAGATAAATGAGATCATACGCCTCCCCTTGTATGCAGACAGAATACAAAGGGATATCAAGGCTCACCAACACATGGTCTCTGCAAGGCGCAGGTGA 1392 0.403 MIVHFLVRSESISVTEAINKFAWARDPGIYKQDYIDALYMFYHERKPEEVVCPQTPEWKRLSDPDFHGAAVPTIENCGDVLPHENIMRNEVLTNDDVLGDPVPSHQLYTMRQECYQLLKMGKGGRGPLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITCDGCYLIDRKFHFRKVYMRFPCKYINGGTPERNHHYTLLDGEMIIDMDPHTQKQERRYLIYDLMAINQVSVTELPFYERWKLLEKEVIEPRNMEREALCKSINPYYRYDLEPFSVRRKGFWLLSTVSKLLNKFIPQLSHPSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFELGAGERRLLFLHERGKKKLMEGSRVVFKDVEDISSYSGKIVECSWDPEENHWICMRTRIDKSTPNEMNTYRKVMRSIKDNITEEVVLKEINEIIRLPLYADRIQRDIKAHQHMVSARRR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0585 463 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 103 333 - -
Sto8g0585 463 Pfam mRNA capping enzyme, catalytic domain 134 332 IPR001339 GO:0004484|GO:0005524|GO:0006370
Sto8g0585 463 Gene3D DNA ligase/mRNA capping enzyme 93 330 - -
Sto8g0585 463 SUPERFAMILY Nucleic acid-binding proteins 335 448 IPR012340 -
Sto8g0585 463 Gene3D Protein tyrosine phosphatase superfamily 1 68 IPR029021 -
Sto8g0585 463 PANTHER MRNA-CAPPING ENZYME-LIKE 1 463 - -
Sto8g0585 463 PANTHER MRNA-CAPPING ENZYME 1 463 - -
Sto8g0585 463 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 1 59 IPR029021 -
Sto8g0585 463 Gene3D - 331 440 IPR012340 -
Sto8g0585 463 PIRSF mRNA_capping_HCE 1 463 IPR017074 GO:0004484|GO:0006370|GO:0140818
Sto8g0585 463 CDD Adenylation_mRNA_capping 106 333 IPR001339 GO:0004484|GO:0005524|GO:0006370
Sto8g0585 463 Pfam mRNA capping enzyme, C-terminal domain 337 430 IPR013846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0585 Sto-Chr8 3587140 3591621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0585 1 463 Protein tyrosine phosphatase (PTP) family AT3G09100 64.468 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0585 K13917 - gmx:100778292 802.742