Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0556 ATGTCcctcctcttttttttcttcttcttcatcttccctCTTTCTTCCTTCGCCGCCAACGACACCAATCTCACCGCTCCTTGCCCCCTCAACTTCACCGTTCTCACCGTCGTCAGCGGTGGCTCCCCTCCCTCTTTCGACTCCGGCACCCGTTGCCAGTACACCCGCCAAGCTCTCCGTCTCGTTCAATCCGACTACCTCCGCCGCACTGGATTCTTCCTCTCCCCTGTTAACTCCTCCGAAACCTGCTGGGACGATTTCCAGTCTTTCATCAATCAATACGACTCCAATTTCGATATTCGCTCCTCCTGTGGCTTCCAAACTACATGGATCTCCGAAGGATGCATCAACATCACCACCAAGCAAGATTTCGAAGCCTTGGTTCCTTCGGCGACTCTTCAAAATGTTGAATCCAGTTGCAATCAATCCCTCGAGAATAGCTCCCCCTGCGCCCTCTGTACAACCAGCTTGTCCACCTTGCAAGCCTCCTACCTCACCGGACCCTCCGTCGGCAACGTCTCCGATTGCGCCTCCTATTCTTTAATTTACGCCGCCGCCTTTGCGAATCAGGGTGGACCCACCGACAGGGGGACTGCCAGGTGCTTGTTCTCTCTGGATTTCACGTCCTCAGGTTCCAGCGGTAAGAAACGAACGATTGTGATAGTGGTTGTTGTAATTGTTATGGTATTGGTTTTGTTGCTGCTGATtgctgggttttgggtttatcggAGATTAAAGGAGGAGAAGAACAATAACAAGAGTTTCGGTAAAACTGAGATGGGTGTGATTTCTGGGTTGGATTCCATTAACCAAAGCACTACTTTGATTAGGTTCACatttgatgaaattaaaaagataacTAGGAACTTCTCTAGGGATAGTATAATAGGGAGAGGAGGATATGGGAATGTGTATAAAGGAGTGCTCCCAGATGGAACTGAAGTTGCATTGAAAAGGTTTAAGAATTGTTCTGCTGCAGGAGATGCAAGTTTCACTCATGAAGTTGAGGTGATTGCAAGTGTTAGGCATGTGAACCTAGTTGCTCTCAGAGGCTATTGTACTGCCACAACTCAATTAGAAGGACACCAGAGGATTATTGTGTGTGATTTGATGAAGAATGGGAGTGTTCATGATCATTTATTTGGTAATATGGGGAAGAAACTGAGTTGGCCAATGCGTCAACAGATTGCACTAGGGACTGCAAGAGGATTGGCTTATTTGCACTACGGTGCTCAACCTTCCATCATCCATAGGGACATCAAAGCCAGTAATATACTTCTGGATGAGAAGTTTGAAGCAAAAGTAGCAGATTTTGGACTTGCGAAGTTCAACCCTGAGGGAATGACACACATGAGCACCAGGGTTGCTGGAACAATGGGGTATGTTGCTCCTGAGTATGCACTGTATGGGCAGTTGACAGAGAGAAGTGATGTGTTCAGTTACGGTGTGGTGCTTCTTGAGCTATTGAGTGGGAAGAAGGCTCTTCAAACGAACGATGAAAGCCAACCCACTGCTCTCACTGACTTAGCCTGGTCATTGGTTAGAGCAGGTAGGCCTTTGGATGTTATTGAAGATGGCATGCCAGAAGCAGGTTCTCCAGAAGTGCTTGagaagtatgtgttaattgctGTGCTTTGTTCTCACCCACAGTTATATGCTAGGCCAACAATGGATCAGGTTGTGAAGATGTTGGAGACAGATCAATCAGTACCTTCAATACCAGAACGCCCAATTCCTCTGGTTGCTGGGAGGATTGATATTGAACGATCTGCGGGAAGCTTTGGTGGCTCTGGTCAACTTTCTAGCCCAACAGGTTATCAAGCATATGCATTTGAAAGTGACTGCCGATCTTTTAATTCTAAGGAAGAAGGAAGTTCAGGGTCCAGAGTACTTAGTACAGATTGA 1905 0.4499 MSLLFFFFFFIFPLSSFAANDTNLTAPCPLNFTVLTVVSGGSPPSFDSGTRCQYTRQALRLVQSDYLRRTGFFLSPVNSSETCWDDFQSFINQYDSNFDIRSSCGFQTTWISEGCINITTKQDFEALVPSATLQNVESSCNQSLENSSPCALCTTSLSTLQASYLTGPSVGNVSDCASYSLIYAAAFANQGGPTDRGTARCLFSLDFTSSGSSGKKRTIVIVVVVIVMVLVLLLLIAGFWVYRRLKEEKNNNKSFGKTEMGVISGLDSINQSTTLIRFTFDEIKKITRNFSRDSIIGRGGYGNVYKGVLPDGTEVALKRFKNCSAAGDASFTHEVEVIASVRHVNLVALRGYCTATTQLEGHQRIIVCDLMKNGSVHDHLFGNMGKKLSWPMRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQTNDESQPTALTDLAWSLVRAGRPLDVIEDGMPEAGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETDQSVPSIPERPIPLVAGRIDIERSAGSFGGSGQLSSPTGYQAYAFESDCRSFNSKEEGSSGSRVLSTD 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0556 634 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 18 619 - -
Sto8g0556 634 Pfam SPARK 25 173 IPR043891 -
Sto8g0556 634 Gene3D Phosphorylase Kinase; domain 1 244 369 - -
Sto8g0556 634 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Sto8g0556 634 PANTHER OS01G0253100 PROTEIN 18 619 IPR045271 GO:0004714|GO:0006468
Sto8g0556 634 ProSiteProfiles Protein kinase domain profile. 290 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0556 634 Pfam Protein kinase domain 291 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0556 634 SUPERFAMILY Protein kinase-like (PK-like) 266 565 IPR011009 -
Sto8g0556 634 CDD STKc_IRAK 296 565 - -
Sto8g0556 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Sto8g0556 634 Gene3D Transferase(Phosphotransferase) domain 1 371 572 - -
Sto8g0556 634 SMART serkin_6 290 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0556 Sto-Chr8 3418601 3420505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0556 9 620 Receptor kinase-like Gene Family AT2G48010 64.437 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Sto8g0556 Pkinase 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0556 - - gmx:100800760 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0556 8 3418601 3420505 Sto8g0556 8 3418601 3420505 ECH