Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0555 ATGAAGGTGAAGGCAGATTCAAATTCACCAGTTGGGGTTCTTGAGGATTATTTTAGGAGCTCAGAGTCTGATACAAGTTCTTCCAAAGAACCCACTCTAGATTCCGAGACTCAAGACAAGTcaattttttcttctaaattgcGTGGGTTTTTCCAACTTCTGAGGACCACATCGAAAAAacccacacccaccaccaccttGCATCCTCTGAAGCTCTCAAAACGAATGAGCAGAAGCATGAGAGACACCATTTTCCCAAATTGTCGGTTGAATAATACAGACTCCTCCTTCCAAAACTCCCCATGGAAGATCTTTTCTCACACTGAGATTCTACTCGCAACCaattctttcagccaagaaaaCCTAATTGGGAAAGGTGGGTATGCTCAAGTGTACAGAGGAAGCTTGCCTAATGGCCAGGTGGTGGCCATTAAGAAGCTCACACGTGGAACCCCTGATGAAATCATAGGCGACTTCTTATCCGAGCTTGGCATAATGGCACATGTCAACCATACCAATACTGCTAAACTAGTTGGCTATGGAGTTGAAGGAGGAATGCACCTTGTTCTTCAATTCTCTCAAAAAGGCAGTTTAGCTTCTGTGCTTCATGGTTCCAAGGAAAAACTGCCATGGTGTATTCGGTATAAAATTGCATTAGGAACAGCTAAGGGTATATTATATCTCCACGAGGGTTGTCAAAGAAGAATTATTCACAGAGATATAAAGGCAGCCAACATCTTGCTCACAGAGGACTATGAGCCTCAGATTTGTGATTATGGGCTAGCAAAATGGCTGCCTGAGAATTGGACTCACCACACCGTTTCAAAATTCGAAGGAACCTTTGGATATCTTGCTCCTGAATACTTACTTCATGGAATAGTAGACGAGAAAACAGACGTATTTGCTTTTGGTGTTCTGCTCTTAGAATTGGTCACTGGACGGAGAGCTCTGGATTATTCACAGCAAAGCCTTGTTTTGTGGGCAAAACCATTGctgaaaaagaataatataagagaGCTGATTGATCCATCAATGGATAATAACTTGGATTCTCGACAGATAAATCTTGTGCTCTTGGCTGCTTCTCTATGCATACAACAATCCTCAATTCGCAGACCTTCCATGAGGCAGGTTGTGCAGCTTTTGAATGGTAACCTTAGCTGCTTCAAGTGCATGAAGAAGACGAGATTGCCATTTTTTCGGAAACTTTTTCACCAAGAGCTTCTTGACTCTGAATAG 1239 0.4003 MKVKADSNSPVGVLEDYFRSSESDTSSSKEPTLDSETQDKSIFSSKLRGFFQLLRTTSKKPTPTTTLHPLKLSKRMSRSMRDTIFPNCRLNNTDSSFQNSPWKIFSHTEILLATNSFSQENLIGKGGYAQVYRGSLPNGQVVAIKKLTRGTPDEIIGDFLSELGIMAHVNHTNTAKLVGYGVEGGMHLVLQFSQKGSLASVLHGSKEKLPWCIRYKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDYGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQSLVLWAKPLLKKNNIRELIDPSMDNNLDSRQINLVLLAASLCIQQSSIRRPSMRQVVQLLNGNLSCFKCMKKTRLPFFRKLFHQELLDSE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0555 412 Pfam Protein kinase domain 118 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0555 412 SUPERFAMILY Protein kinase-like (PK-like) 93 382 IPR011009 -
Sto8g0555 412 Gene3D Transferase(Phosphotransferase) domain 1 194 395 - -
Sto8g0555 412 MobiDBLite consensus disorder prediction 19 39 - -
Sto8g0555 412 SMART serkin_6 117 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0555 412 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Sto8g0555 412 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 411 - -
Sto8g0555 412 PANTHER OS08G0249100 PROTEIN 1 411 - -
Sto8g0555 412 Gene3D Phosphorylase Kinase; domain 1 83 192 - -
Sto8g0555 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Sto8g0555 412 ProSiteProfiles Protein kinase domain profile. 117 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0555 412 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0555 Sto-Chr8 3411465 3413201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0555 104 378 Trihelix Transcription Factor Family AT1G68690 41.958 5.28e-69 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto8g0555 Pkinase 1.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0555 - - gmx:100780587 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0555 8 3411465 3413201 Sto13g3566 13 38228984 38230497 CCT
Sto8g0555 8 3411465 3413201 Sto13g3923 13 40314187 40315826 ECH
Sto8g0555 8 3411465 3413201 Sto8g0555 8 3411465 3413201 ECH
Sto8g0555 8 3411465 3413201 Sto13g3566 13 38228984 38230497 ECH
Sto3g0269 3 1804770 1808259 Sto8g0555 8 3411465 3413201 ECH