Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0531 ATGAGGGACAAAAGAAGGATCATGGATATTGCTATAGCCGCTGCATCAAACCAGGGGGGTGCTGCTACCCTCCCGGAAGCTGCTGCTCAAACTCCGACATCTAACTATGACGCCGCCCCCCTCCAAGATGTGAACGATGATTTATACAAGGAACTGTGGCAAGCATGCGCCGGCCCTTCTGTTAAAGTTCCTCGCATGGGAGAATTGGTTTTCTACTTTCCTCAAGGTCACTTGGAACAGGTCGCTGCCTTGATTCCACCGGATGGTCAAATAGAAATTCCTGTATATGATTTGCCTTCGAAGATCCTTTGCAGAGTTTTGAGTGTTCATTTAATGGCCGAAGCTTACTCAGATGAGGTCTTTGCTCAAATTACTTTACTTCCAGAGTCAAATGAAGAAGCTCTTAGTTCAGTGGGAAGAAACTCTTGTCTATTACCCAGCAGAACAACCATTGCCAGGAAGACACTCACTCAATCAGACACGAGTACACATGGAGGATTCTCTATACCCAAGAGACTTGCTGATGAATGCTTCCCTCCTCTGGATTTGTCTCAGCAACCACCGTCCCAAGATCTAGTTGTGAAGGACTTGCATGGTTTTATATGGAATTTTCGCCATATCTATCGAGGTCAGCCAAAACGACACTTGCTTACTAGTGGCTGGAGCACATTCGTTAATTCAAAAAAGCTTGTTGCCGGGGATACTTGCATTTTCGTTCGTGGAGAAGATGGACAACTTCGTATTGGAATCCGTCGAGCAAGGAAACAACATAACAATGCATCCACATCCGCTTCTGTAATATCTGGCCATAGCATGCAACTTGGGATACTGACCAGTGCTTCTTTCGCTATTGGTACAGGAACCAGGTTCATTGCCTACTACCATCCTTGGACTAATTCCTCTGAATTCATTATTCCACTGGATCATTACATGAAGTCAACTAAGATGGAATACTCATTTGGAATGAGGGTACAAATGCAGTGTGAAGCCGAAGAATCTACAAAGAGATATACAGGTATCATTATGGGTATCGACGATATTGACGGCGTTAGGTGGCCTCGTTCAGAATGGAGATGCCTGAAGGTGCAATGGGATGGCATGCCTGAGACATATATGCGTCCTGACAGGGTTTCTCCTTGGAACATTGAGCCTCTGGATTTAGAGGGGAAGAAAATTCCTAATCTACCCCCACCGAAGAAGCCACGTGTAGTGAGCCCATCACTGCCTGTATTTTGTCGTTTTACAAAGGATGACATCGATTTGAATTCAGTCAAGCATGCATCTCAGAGATCTGAAAGGGACTTACAAGGTCAAGATTACAATGAAGTAGGTTCTCAACTAGCTGAAAAGCTATTATTAACAGATGCACGTCCGCCATCAAATGCCGCATTGTATGATCCACAGCTGAGGATGACGAATCAGCTACACTTTCAACTGCAAAGCCCTCTTTGTCATTCCCTTGGCAGCTCAGTGTCATTTCCAGATGATAACATTTCGACTTCAAGCCTCCCTAAACAGCCCCCAATCCCCACCACTTATGAAGCATGCAAAACTGTGTCTGTCACCAGGTACTTTTCACCCTCAAAAGGGAACTCCAACGATTCTGAATCCCAGGTGTGGCGGGCGTCCGATTCTAGGGATGAGAATGAAGTTCCTTTTGGCCAACCAGGCAGCTATGGTAGATTTGAATACAAACTTTTCGGTGTTAGCTTAAACAACCCGGAGCTCCCTTCACCACAAGTTCCTATTTCTAGCAATACTTCAAATCAATTTTCTGTTCCTCCAATGTCTCAGTCAAGCATTTCTGCAACTATACCCGTTACCTCACAGAAAAAATGCAAGAAATGTTGCTCTGTAAGTAGTAGGAGTTGCACAAAGGTACTTAAGCATGGAAGTGCTCTTGGCAGATCAATTGACCTCACGCGTATTTCTGGATATGCTGAACTCATTTCTGAACTGGACTCCATGTTTGATTTTAAAGGAAGCTTGATAGATGGAAGCAGTGGATGGAATGTGATTTCCATTGATGATGATGGGGATTTGGCGATGTTTGGTGATTACCCTTGGCAGGATTTCCAGCGCACAGTGCAAAAGATGATCATTCGTCCAAGGGAAGAAACCAATAACCTGAATGCTATTATTGCCAGCACAACAGACTCCACAACCTTGAATCGCTGTGCAAACAAAGATGTTTACGAGTCGGACAGCACTAATGCAGCTATGTAG 2226 0.4461 MRDKRRIMDIAIAAASNQGGAATLPEAAAQTPTSNYDAAPLQDVNDDLYKELWQACAGPSVKVPRMGELVFYFPQGHLEQVAALIPPDGQIEIPVYDLPSKILCRVLSVHLMAEAYSDEVFAQITLLPESNEEALSSVGRNSCLLPSRTTIARKTLTQSDTSTHGGFSIPKRLADECFPPLDLSQQPPSQDLVVKDLHGFIWNFRHIYRGQPKRHLLTSGWSTFVNSKKLVAGDTCIFVRGEDGQLRIGIRRARKQHNNASTSASVISGHSMQLGILTSASFAIGTGTRFIAYYHPWTNSSEFIIPLDHYMKSTKMEYSFGMRVQMQCEAEESTKRYTGIIMGIDDIDGVRWPRSEWRCLKVQWDGMPETYMRPDRVSPWNIEPLDLEGKKIPNLPPPKKPRVVSPSLPVFCRFTKDDIDLNSVKHASQRSERDLQGQDYNEVGSQLAEKLLLTDARPPSNAALYDPQLRMTNQLHFQLQSPLCHSLGSSVSFPDDNISTSSLPKQPPIPTTYEACKTVSVTRYFSPSKGNSNDSESQVWRASDSRDENEVPFGQPGSYGRFEYKLFGVSLNNPELPSPQVPISSNTSNQFSVPPMSQSSISATIPVTSQKKCKKCCSVSSRSCTKVLKHGSALGRSIDLTRISGYAELISELDSMFDFKGSLIDGSSGWNVISIDDDGDLAMFGDYPWQDFQRTVQKMIIRPREETNNLNAIIASTTDSTTLNRCANKDVYESDSTNAAM 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0531 741 PANTHER AUXIN RESPONSE FACTOR 40 713 - -
Sto8g0531 741 MobiDBLite consensus disorder prediction 526 552 - -
Sto8g0531 741 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 40 713 IPR044835 GO:0003677|GO:0006355|GO:0009725
Sto8g0531 741 Pfam B3 DNA binding domain 154 253 IPR003340 GO:0003677
Sto8g0531 741 ProSiteProfiles PB1 domain profile. 622 704 IPR000270 GO:0005515
Sto8g0531 741 SMART B3_2 152 254 IPR003340 GO:0003677
Sto8g0531 741 SUPERFAMILY DNA-binding pseudobarrel domain 150 280 IPR015300 -
Sto8g0531 741 CDD B3_DNA 154 252 IPR003340 GO:0003677
Sto8g0531 741 Gene3D - 617 711 - -
Sto8g0531 741 Gene3D - 152 253 IPR015300 -
Sto8g0531 741 SUPERFAMILY CAD & PB1 domains 624 698 - -
Sto8g0531 741 ProSiteProfiles B3 DNA-binding domain profile. 152 254 IPR003340 GO:0003677
Sto8g0531 741 Pfam AUX/IAA family 610 702 IPR033389 -
Sto8g0531 741 Gene3D - 317 389 - -
Sto8g0531 741 Pfam Auxin response factor 281 361 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0531 Sto-Chr8 3269537 3273763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0531 620 711 B3 DNA Binding Superfamily AT5G62000 45.652 2.65e-21 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Sto8g0531 B3 1.7e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0531 - - lja:Lj1g3v4764520.2 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0531 8 3269537 3273763 Sto8g0531 8 3269537 3273763 ECH