Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0523 ATGAGCGATTCTCCGAAACACCCAGATCCAGAGGTTCATACTCACAGTCACAGTCACAGACCATGTGACTATTGCGGCGACGCCACTGCTCTTCTCTACTGCCGAGCTGATTCCGCCAAACTCTGCTTCTCTTGTGATCGTGAAGTTCACTCTACCAACCAGCTTTTCTCCAAGCACACTCGCGCTCTCCTCTGTGATGCTTGCCACGATTCCCCTGCCACCATACTCTGCTCTTCCGAGACCTCCGTTCTCTGCCAGAATTGTGACTGGGAGAGGCACAACCTCTCCCTATCTTCCGTGCATGACCGGAGGCCACTCGAGGGTTTCACTGGCTGTCCTCCAGTCACTGAGATGTTGACTATTCTAGGTTTTGAAGATATGAGCAAGAAAGACTTGATTTCCACCCAGCCTTCTGGTGGTGATGCCTTCTTGGGATCTGATCTTGAAGACGGTCTTTCCGATTATTTTGTATGGGACGCTCCTGCTGTTGTTAGCCTTGACGATTTGATCACTTCTACGAGCTCCTCTCATAATTATCAAGCCATGGAGGTTCCTCCTCTGCCTAAGAATCGTAAGGCTGCTTGTGGGCAACACAAAGAAGAAATCATTAATCAGCTTCGTGAACTAGCAAAGTCGGAACCCAACTTGAGTTTTGGAGATGTGGATACCGAAGGAATTGGCTCTATGCACCCTTTGGTCCCTGAACATGAACAATATTTGCAGTCGGGAAATATGTCCACGGGTTTTGAAGATGACTTCAAGACTGATTTTCTCCCTGCTTGTGAGGCTGGTATTTTCGagtgggagagagagaggagcgAGACCGGGAATCAAGTTGTGCCTCCTAATTCATCGCGGATAGCTTATAAAGAGGAAGTTCATGATTCACATTCAGTTTCTGCTATCTCTGGGAATCATGCTCAGGGTAAGGAAGCAGAACAACGCCCAAGTTCTCTTAATTCTGAAGCCCTATCGACCACTCCAAAAGTTGCTCCATATGAACTATCAAGTCAAGAAAGGGACTCTGCATTATTACGTTacaaggagaagaagagaacaAGAAGATATGAGAAGCATATAAGGTATGAATCACGAAAAGTTCGAGCGGAGAGCAGGACAAGAGTAAAGGGACGGTTTGCCAAGTGGTCATGTGACGACATTACAAACCCTCATCCATTGCACTCCTATTCGCCGAAAACAGCAACGCCACTGCAAAACGAAGCACCACATCATGaatatatatttgtttcacTGTGCAACCCTGTTAGGGGCACAGCTCGGTTGAGACGAAGAGTCTGCAAGTTTGGACACCTGGAAACCAGGCGCTCAAGTGCAGATAAACTCACCTCTGACCCTATGCAAGAGATGTTTAGAGAAACTAGTGATGTGAATGAATCAGGAAAATGGCTTAGCCAATGCCCACCAAGTTACGACCATCCTCTTGAGTCGGATCTCCTCAAGCCACGGATAGGCAGTTGCCATAGCCGCGATCCAAGGGCAGACAAAACCACCCCAGCCCTCGGGCACCAAATTGAAGTCGGCAAAGTGAGGTTTCCCCTTGAGAGAAATGGATCTCACCTCCGGGAACCGTTTGGTGACGGTCCTAGGGTTAACGGCATAGCAGTTGCCGATGAAAATCCTCCTCCGACACCAGCGCTCGATCTCGTACCATGA 1674 0.4689 MSDSPKHPDPEVHTHSHSHRPCDYCGDATALLYCRADSAKLCFSCDREVHSTNQLFSKHTRALLCDACHDSPATILCSSETSVLCQNCDWERHNLSLSSVHDRRPLEGFTGCPPVTEMLTILGFEDMSKKDLISTQPSGGDAFLGSDLEDGLSDYFVWDAPAVVSLDDLITSTSSSHNYQAMEVPPLPKNRKAACGQHKEEIINQLRELAKSEPNLSFGDVDTEGIGSMHPLVPEHEQYLQSGNMSTGFEDDFKTDFLPACEAGIFEWERERSETGNQVVPPNSSRIAYKEEVHDSHSVSAISGNHAQGKEAEQRPSSLNSEALSTTPKVAPYELSSQERDSALLRYKEKKRTRRYEKHIRYESRKVRAESRTRVKGRFAKWSCDDITNPHPLHSYSPKTATPLQNEAPHHEYIFVSLCNPVRGTARLRRRVCKFGHLETRRSSADKLTSDPMQEMFRETSDVNESGKWLSQCPPSYDHPLESDLLKPRIGSCHSRDPRADKTTPALGHQIEVGKVRFPLERNGSHLREPFGDGPRVNGIAVADENPPPTPALDLVP 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0523 557 Pfam B-box zinc finger 20 61 IPR000315 GO:0008270
Sto8g0523 557 MobiDBLite consensus disorder prediction 1 20 - -
Sto8g0523 557 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 13 17 382 - -
Sto8g0523 557 SMART bboxneu5 17 64 IPR000315 GO:0008270
Sto8g0523 557 SMART bboxneu5 65 106 IPR000315 GO:0008270
Sto8g0523 557 ProSiteProfiles Zinc finger B-box type profile. 60 106 IPR000315 GO:0008270
Sto8g0523 557 ProSiteProfiles Zinc finger B-box type profile. 17 64 IPR000315 GO:0008270
Sto8g0523 557 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 382 - -
Sto8g0523 557 CDD Bbox1_BBX-like 64 106 - -
Sto8g0523 557 MobiDBLite consensus disorder prediction 524 557 - -
Sto8g0523 557 MobiDBLite consensus disorder prediction 304 333 - -
Sto8g0523 557 Pfam CCT motif 340 381 IPR010402 GO:0005515
Sto8g0523 557 CDD Bbox1_BBX-like 21 64 - -
Sto8g0523 557 ProSiteProfiles CCT domain profile. 340 382 IPR010402 GO:0005515
Sto8g0523 557 MobiDBLite consensus disorder prediction 304 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0523 Sto-Chr8 3215774 3223475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0523 20 355 C2C2-CO-like Transcription Factor Family AT2G47890 41.124 2.37e-73 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Sto8g0523 CCT 1.1e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0523 - - gmx:100777428 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0523 8 3215774 3223475 Sto8g0523 8 3215774 3223475 ECH