Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0516 ATGGGTGTTGTTACTGTTTCTGAATTGAAGCCCAGTATTTCAGGGAAGAGATCCTTTCGTCCAAATTCAAGCATAAGGCATGCCACTGAATGGCCAATCTCTGATGTCTCTAGTGACCTTACCGTTGAAGTAGGAGCATCAAGCTTTGCACTTCACAAGTTTCCTCTGGTTTCTAGAAGTGGAAAAATCAGGAAACTGCTGTTAGAAGCGAAAGATTCTAAAGTTTCACGCATAAGTCTCCTAACAGTGCCaggtggagcagaggcatttGAGCTAGCAGCCAAGTTCTGTTATGGAATCAACATTGAGTTCACCCTCTCAAACATTGCCATGCTACGTTGTGTCTCCCATTTTCTGGAAATGACAGAAGAATTTGCAGAGAAAAACTTGGAGACACGAGCTGAATCATATCTGAAGGAGACAGTGCTTCCAAACATTTCACACTCCATATCTGTTCTTCATCGTTGTGAAACTCTAGTGCCTACATCAGAAGAGATACACCTTGTTAGCAGACTAATCAATGCAATTGCAAATAATGCCTGCAAAGAACAACTCACCTCTGGCTTGCTAAAACTTGACCACAATTTCCCTTCTAAAACCATCTCAAGCATGGAACCAGAAACACCCTCAGACTGGTGGGGAAAATCTCTCAACGTTCTTAATCTTGATTTCTTCCAAAGAGTCCTATCTGCAGTCAAGTCAAAGGGACTAAAACAGGATATGATCAGCAAGATTTTGATAAACTATGCTCATAATTCTCTTCAAGGGATTGCTGTTAGGGACCCCAAGGTGTTGAAAAAACAAAGGGTCATTGTGGAAGCCATAGTTAGCTTACTACCAACTCAATCAAGGAAGAGTCCAGTCCCAATGGCATTTCTTTCAAGCTTGCTAAAAGCTGCAATAGCAGCATCAGCTTCCACTTCTTGCAGGTCTGATTTGGAGAGAAGGATAGGTCTCCAACTTGACCAGGCAATTCTTGAAGACATCCTAATTCCAGCAACCTCAAGTCAGAATTCCCACTGCACAATATATGACACAGACTCCATTTTGAGAATCTTTTCCATTTTTCTCAACTTggatgaggaagatgatgaagatagTCACTTGAGAGATGAGAGTGAAATGGTTTATGACTTTGACAGCCCAGGATCTCCAAAACAAAGCTCAATTCTCAAGGTGTCCAAGTTGTTAGACACTTATCTTGCAGAAGTAGCATTAGACTCGAATTTGCTGCCATCAAAGTTCATAGCACTTGCAGAATTGCTCCCGGATCATGCACGTATTGTAAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTCAAGGTTCATCCAAATATGAAGGACTCAGAGCGATACCGGCTTTGCAAAACCATTGACTGTCAGAAACTATCTCAGGAAGCATGCAGCCACGCAGCTCAAAATGAAAGGCTTCCAGTGCAAATGGCAGTACAAGTTCTGTACTTTGAGCAAATTAGGCTTCGAAATGCGATGAATGGGGGAAATAACCAATTCTTCTTTGGTGGACTAAATGGTCAATTCCCTCAACGTTCAGGAAGTGGTGCTGGAAGTGGAGCCATTTCACCAAGAGATAACTATGCATCAGTGAGAAGGGAGAACCGAGAGCTGAAGCTTGAAGTTGCAAGAATGAGAATGAGGCTGACGGATTTGGAGAAAGATCATGTGTCCATGAAGCAGGAGCTTGTGAGGACTCATCCTGCTAACAAGTTATTTAAGTCATTTACAAAAAAGCTAAGCAAGCTCAATGCTTTGTTTCGAATTAACAGTATTAAGCCAATTGGAGGAGGGAAATCTAGTTCAGAAAGTCGATTCCCTTTTCAGAAGAGAAGGCGTCACTCAGTTTCATGA 1869 0.4104 MGVVTVSELKPSISGKRSFRPNSSIRHATEWPISDVSSDLTVEVGASSFALHKFPLVSRSGKIRKLLLEAKDSKVSRISLLTVPGGAEAFELAAKFCYGINIEFTLSNIAMLRCVSHFLEMTEEFAEKNLETRAESYLKETVLPNISHSISVLHRCETLVPTSEEIHLVSRLINAIANNACKEQLTSGLLKLDHNFPSKTISSMEPETPSDWWGKSLNVLNLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGIAVRDPKVLKKQRVIVEAIVSLLPTQSRKSPVPMAFLSSLLKAAIAASASTSCRSDLERRIGLQLDQAILEDILIPATSSQNSHCTIYDTDSILRIFSIFLNLDEEDDEDSHLRDESEMVYDFDSPGSPKQSSILKVSKLLDTYLAEVALDSNLLPSKFIALAELLPDHARIVSDGLYRAVDIFLKVHPNMKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGNNQFFFGGLNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVRTHPANKLFKSFTKKLSKLNALFRINSIKPIGGGKSSSESRFPFQKRRRHSVS 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0516 622 PANTHER OS12G0117600 PROTEIN 25 615 IPR043454 -
Sto8g0516 622 Gene3D Potassium Channel Kv1.1; Chain A 25 145 IPR011333 -
Sto8g0516 622 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 615 - -
Sto8g0516 622 MobiDBLite consensus disorder prediction 602 622 - -
Sto8g0516 622 Pfam NPH3 family 211 469 IPR027356 -
Sto8g0516 622 SUPERFAMILY POZ domain 25 123 IPR011333 -
Sto8g0516 622 Coils Coil 533 567 - -
Sto8g0516 622 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Sto8g0516 622 ProSiteProfiles NPH3 domain profile. 211 493 IPR027356 -
Sto8g0516 622 Pfam BTB/POZ domain 37 140 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0516 Sto-Chr8 3183153 3186405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0516 1 443 EF-hand Containing Proteins AT2G47860 59.751 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0516 - - rcu:8287167 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0516 8 3183153 3186405 Sto13g3594 13 38353633 38370458 CCT
Sto8g0516 8 3183153 3186405 Sto8g0516 8 3183153 3186405 ECH