Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0514 ATGGTGGAGAGGAGGAAGCCTTTGGTACTCACTTCCACCAAACTGCTCATCAATTCCGTACTCAGCTCATCGCGACTTGGGGAAGCAAGCTCTGGAGCTGGAGACCAGCTCTTCGATGGTGAATCTCCGAGGAACTTACAGTTAGCGGTGGGGATTCTCCGATTCTCGAAGGACGGAAATGAGAAACTAGAACCCCAATTGGCAGCTCTTGACGATTCTGCGTTGGTCGGCCTCTCAACTTCGCTTTTGAGAAGGCTTTCTATTACTTCGGGTTCACTGGTGCTTGTCAAGAATGTTGAGATGAACTTACAGAGAATTGCACAGGCAATTTCCTTAGATCCTCCCGGTTGCCATGAGTGCACATCTGATGTTAAATTGCCCTCTCCTCAGTCTTCTCACGTAATGCTTGTATTTCCTTCCTGTGCTTTCCCTCATAGTGACACAGTGTTAGATGGCGAAGTTGCTTATATATCTCCTCTCTTAGCTTTTAACCTCAATTTGCATATAACATGCTTAGAATCCATTCTACACCAAGGGAAAGAGGTTTTAGCATCTTATTTCAAACCAGAAGTGGATGATGAGGCTACTGCAAAAAGCACTAAGGCTTCTTCCATTAATATAGTATTAGTACCTTTTGATCGAGCTCCTAGGTATGCATCACATCTAAGGGTTTCTTTTGTGAAGATACCAGAATGTGGTGCCCTTGAATCATTTAGAGGAAATTCACCAGTTGAATCAGAAGAACGCCAAGATATGATTGATTTAGCATTACAAAAATACTTTGAAGTGGATAGATATTTGACGAGAGGAGATGTTTTTGGCATCGACATAAAGTGGAACTGCAATTCAACTATATGCATTCCGTGCAACCGAAAATCACAAAAGCAAAATGGCAATCTTATCTACTTCAAGGTCATTGCTATGGAACCATCAGATGAACCAGTTCTTCGTGTCAATCGAACTTCAACTGCTTTGGTGCTTGGAGGGAGCTCCACTTCTGCTCTTCCTCCAGATTTGTTAATTTCTGGGCAAGAGGAGCCTGTGCCTTTGCAAGAGGACATAGTAAAAATTTTGGCTTCAATACTTACACCACCCTTCTGTCCATCAGCGCTTTCATCAAAATTCAGAGTTTCTGTTTTATTGTATGGCTTAGCGGGTTGTGGGAAGAGGACTGTCATTAGACATGTTGCTCGTCGACTGGGCCTGCATGTGGTGGAATATAACTGTCATGATTTGATGATGTCTGAAAGGAATACATCTGTTGCACTAGCTCAAGCTTTCAAGACAGCTCAAAGGTACTCACCAACTATACTTCTTCTCCGCCATTTTGATGTTTTTCGAGATATGCAAACTCCCGATGGTCCATTAAATGATCAAAGAGGCAATACATCTGAAATTGCATCAATCATTAGGAAATTTACTGAGCCAATTCATGAATATGGTGATATCTACTCCCATGGGAAACCAAATGGTGAATTTGGTGAGAAGAGTGCTGAAAAGACCAGTGGACATCAGATCCTGTTGATTGCTGCTGCTGTCAGTTCAGAAGGTCTGCCTCCAACTATCAGACGCTGCTTCAGCCATGAAATAAATATGGGGCCCTTGACTGAAGAGCAGAGGACTGAAATGCTATCCCAGTCACTGCAAAGTGTTTCTGAACTCCTCTCAAATACTGATTCTGAGAGTTTTGTGAAAGAAATAGTTGGGCAGACATCTGGTTTTGTGCTGAGGGACATGTGTGCTTTGATTGCTGATGTTGGAGCCAACTTATTTCCCAGGAGTTCTGATGCAGTTGACAAAGTCAGGCCTGAGGATGTAGATGATTCTCTTACTACTGAAGTGATGCAGGATAGCAACCACCGGAAAGTTTCACCTCAGGTTCCTGGGAAAGAAGATTTGACAAAAGCTTTGGAACGATCGAAGAAAAGAAATGCAGCAGCATTGGGTGCTCCAAAGgtTCCCAATGTAAAATGGGAAGATGTTGGTGGACTAGAAGATGTGAAAAAATCAATCCTGGATACTGTTCAGTTGCCTCTCCTGCATAAGGATTTATTTTCATCTGGACTACGTAAGCGGTCTGGTGTTCTTCTATATGGTCCCCCCGGAACTGGCAAAACATTATTAGCCAAAGCTGTTGCTACCGAATGTTCCTTAAATTTTCTTAGTGTTAAAGGGCCTGAACTGATCAACATGTACATAGGAGAGTCTGAGAAGAATGTTCGAGACATTTTCCAGAAGGCCAGATCATCACGTCCATGTGTTATCTTCTTTGATGAGCTTGATTCTCTTGCTCCAGCTCGGGGTGCTTCTGGGGATTCTGGGGGTGTAATGGACAGAGTGGTTTCTCAGATGCTTGCGGAGATTGATGGCCTGAATGATTCTACTCAGGATCTCTTTATCATAGGTGCAAGTAACAGGCCAGACTTGATAGACCCAGCACTTTTACGCCCTGGCCGATTTGATAAACTGCTGTATGTCGGAGTTAATTCTGATGCTTCTTACAGGGAGCGGCaaATGATGAAGCTGACTCATAAAATGAAGAGATGCAAGCATAGAAGCCTTGTTTCTACCGCTAATCATGTATGTTCCTTTGCAACAAATTTGGAAATAAGTAATAGTTGCGGGAAAGCGGGATTTTGTAGTGATGCGAGAAAGGGGCTAGGGTTAAGCGTTGGTGGTGGCAGGACAGAGATGGAGGAGTCTGAGCTTGAAGAAGGCGAGGCCTGCTCATATCAAAACAAAGAAGACGGCGATGCCAGCATCGATCCCGACATGAAAGATTTTATGTATGTGCTGGGACACTTTCAGAAAGACTTTGAAGGTGGAGTTTGTGCGGAGAATCTAGgtatgttataa 2856 0.4331 MVERRKPLVLTSTKLLINSVLSSSRLGEASSGAGDQLFDGESPRNLQLAVGILRFSKDGNEKLEPQLAALDDSALVGLSTSLLRRLSITSGSLVLVKNVEMNLQRIAQAISLDPPGCHECTSDVKLPSPQSSHVMLVFPSCAFPHSDTVLDGEVAYISPLLAFNLNLHITCLESILHQGKEVLASYFKPEVDDEATAKSTKASSINIVLVPFDRAPRYASHLRVSFVKIPECGALESFRGNSPVESEERQDMIDLALQKYFEVDRYLTRGDVFGIDIKWNCNSTICIPCNRKSQKQNGNLIYFKVIAMEPSDEPVLRVNRTSTALVLGGSSTSALPPDLLISGQEEPVPLQEDIVKILASILTPPFCPSALSSKFRVSVLLYGLAGCGKRTVIRHVARRLGLHVVEYNCHDLMMSERNTSVALAQAFKTAQRYSPTILLLRHFDVFRDMQTPDGPLNDQRGNTSEIASIIRKFTEPIHEYGDIYSHGKPNGEFGEKSAEKTSGHQILLIAAAVSSEGLPPTIRRCFSHEINMGPLTEEQRTEMLSQSLQSVSELLSNTDSESFVKEIVGQTSGFVLRDMCALIADVGANLFPRSSDAVDKVRPEDVDDSLTTEVMQDSNHRKVSPQVPGKEDLTKALERSKKRNAAALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERQMMKLTHKMKRCKHRSLVSTANHVCSFATNLEISNSCGKAGFCSDARKGLGLSVGGGRTEMEESELEEGEACSYQNKEDGDASIDPDMKDFMYVLGHFQKDFEGGVCAENLGML 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0514 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 654 846 IPR027417 -
Sto8g0514 951 Gene3D - 344 556 IPR027417 -
Sto8g0514 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 595 IPR027417 -
Sto8g0514 951 ProSitePatterns AAA-protein family signature. 798 816 IPR003960 GO:0005524|GO:0016887
Sto8g0514 951 CDD AAA 369 440 - -
Sto8g0514 951 Gene3D - 653 828 IPR027417 -
Sto8g0514 951 CDD AAA 689 827 - -
Sto8g0514 951 SMART AAA_5 375 536 IPR003593 -
Sto8g0514 951 SMART AAA_5 691 831 IPR003593 -
Sto8g0514 951 PANTHER PEROXISOME ASSEMBLY FACTOR 2 36 899 - -
Sto8g0514 951 PANTHER AAA-FAMILY ATPASE 36 899 - -
Sto8g0514 951 Pfam ATPase family associated with various cellular activities (AAA) 379 532 IPR003959 GO:0005524|GO:0016887
Sto8g0514 951 Pfam ATPase family associated with various cellular activities (AAA) 695 827 IPR003959 GO:0005524|GO:0016887
Sto8g0514 951 Gene3D - 829 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0514 Sto-Chr8 3154133 3165893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0514 661 905 Calmodulin-binding Proteins AT3G56690 36.546 5.37e-36 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0514 K13339 - gmx:100820183 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3294 13 36562051 36562494 Sto8g0514 8 3154133 3165893 CCT