Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0513 ATGATGGAGGGCTTGAATGATGATTTTTCTCAGCTAGAAATAGGAAGCTCCATGGAGTCGTTCCAAAAGTCATTGGTTTCGCAAAGGGACCTCTTCCATAGCCAGATCGATCAGTTTCAGAAAATTGTCGTCACGCAATGCAAACTCGATGGGGTCAATCCTCTCTCTCAGGAAATGGCAGCTGATGCTCTGTCAATAAAAATTGGAAAAAGACCTAGGGATTTGTTAAATCCAAAGGCTGTAAATTACATGCAATCTATTTTCTCCATTAAAGATGCAATTAGTAAGAAAGAATCTCGTGAGCTCAGTGCTTTATTTGGCATCACAGTGACACAGATTCGTGAGTTTTTTACTAGTCAGCGTTCAAGAATAAGGAGACTAGTTCAACTGTCAAGGGAGAGGGTGATAAGATCTAATTTTTGTGAAGAAGCTCATGATGGATCCCCAATAAACTCTGATTCTATGAGACCAATGGATCCAGCTCCCTTAAATTCTGCTGGCGCCACCAGGGTTCAAGATGCATCTTGTTCAACACCGGATAATGCTTTGTCTGTGCTAAATGACTTAGATAGACATTttgttgataatatttttattttaatgcaAAAGGAGGAAACATTCTCTGGACAGGAGAAATTGATGGAGTGTATATTGAAGATACAGAATTCTTCAGTATTGTGCTGGTTTTTAAGCAGTGGAGGTGTGATGGTATTAGCAACTTGGTTGAGTGAAGCAGCTGTTGAAGAGCAAACAAGTGTTCTTCTTCTTATCTTAAAGGTTCTTTGTCATTTGCCTCTACAACATGCCCTTCCCAAGGACATGTCAGCTATATTGCAGTGTGTTAATAAACTGCGGTTCTACAGGACAGCAGACATATCAAACAGGGCAAGGGATTTGCTGTCAAAGTGGAGCAAATTATTAGCAAGCAATCAAGCAATAAAGAAATCTTCTAGTGTTAAACCTTCTATTGATCCTCAACAAGAGATGGTGCTTCCTCAGAGGAAAGTGGAATCTCCACCAGTTATGAAACTTTTGCCAGCCTCCGTAGATGATTCAACTAAGAAGCCTGTGTTGGGTGTTTCTTCATCTCAAGCTAGGAAGCGCAGAAAAGTGGTGTTGGTGGAGCAGCCTGAGCACAAAACAGTGAGCAGGAGTCCACATGCTGCAAAATCGGGGCCTGTAAGTCAAGGCCGTCCCTTGTCTGCTGATGATATCCAGAAAGCCAAAAAACGTGCATTCTATATGCAGAGCAAGTATGGGAAACCACAAAGTAAAGAATCAAAGACTGATGATGGTCTGCACAAACAGACAGATAAAGTGGGCGTTGTGGCTTCTCCATCTCAAGTTCCTCTTTCACCCAAAATCAAGGAGGACAAGAAATGTCAGTTGGTTCCCTTTCCCTCCAATAGGCAGGAAGATTCCATTGATTCAAAACTGAGAGTGGATTTGAAGGGACCTCTCAGTCTCAGTCTCAGTCTCAGGGAGAAGCGCAAGAGGGTGCAAGTCCCATGGAAGACACCAGCAGAACTGAAACTTAATGAGGCCTGGAGAGTTGGTGGTGGTGAAAACAGCAAAGAGGTTGATGTCCAGAACAACAGAAACCAAAGGGAGAAGCAAACTATTTATCATACTTTGCAGGAGATACCATGTAACCCCAAGGAGCCATGGGACCATGAGATGAATTATGATGACATGTTGACACCACAAATTCCTATTGAGCAGCAGCTAGATAGAAAAGGTGCAGAAACCCCAGTTGCCCCTAATCAAAGTGGAAACCTTAAGGGGGGGCCCACCTCATCTTCATACTCTAATGTTGAACCTGATTTAGAGCTTCTTGCTGTACTGCTCAAAAATCCAGACTTGGTATTTGCCTTGACTTCTGGCCAAGCTGGTAGCTTACCAAGTGAGGAAACTGTGAAGCTGCTTGACATGATCAAGAAAAGTGGTTCCAATATGCCTGAAAATATCAATGTCACACAGGGGAAGGTGCAAGTTTCTCTCCCATCACCAACTCCTTCTAGCGAGCCAAGAACGAGTGCATGGAGGACTGAAGCTGTGAAGAATCCCTTTATACAACAAGCTTCAGCAGCAGCAACTAATGTTGTTTCCTCTTCTGTGCATCATCCCATTCTTCATAGCAATTCTCCAACAATACAGACaccatctttttcttcttcttctgataTAGGTTTAAGTTTAACCATGAAGGACAACATAACCACAGCAAATGCTTCATCAGTTAACTTATCTAGTGCAAATTCACCTTTAGCAAAGTGGTTTGATGGCAATAGTAATTTAAAACCAGTACCTAATTTGAGTGTTCAAGAGGGCTTTTCTAATTCATTCTCACATTCTCACTTTTTGCCCTCTCCAACACCACCAATTTCATTCGCACACCAACCAAGAGGTCCAAATTTAATGCAGACTCAGCCTTCCTATCACAACGCTTCGTTGCATTCTTATCCACCAAAAGCCCAAAATCAATCAGATCTGAGATCTCAACTAAATCAAAACAACTATAACGCAGTGGCTGAGAGAAATGATTATGCATATGCAGGGGAAAGATTTGAATCGTGGAATCCACAGAATAATCCTACTAGAGACAATAGGAATAGTTCCAGAAGAAATTTCACTGAATCCAGAATGAATGCTGAGAGGAATTATAGGCCTGAATGGTCAAGACAACGCGGGATTAGAAAGTGGCATAATCAGAGGCGTTGA 2721 0.4153 MMEGLNDDFSQLEIGSSMESFQKSLVSQRDLFHSQIDQFQKIVVTQCKLDGVNPLSQEMAADALSIKIGKRPRDLLNPKAVNYMQSIFSIKDAISKKESRELSALFGITVTQIREFFTSQRSRIRRLVQLSRERVIRSNFCEEAHDGSPINSDSMRPMDPAPLNSAGATRVQDASCSTPDNALSVLNDLDRHFVDNIFILMQKEETFSGQEKLMECILKIQNSSVLCWFLSSGGVMVLATWLSEAAVEEQTSVLLLILKVLCHLPLQHALPKDMSAILQCVNKLRFYRTADISNRARDLLSKWSKLLASNQAIKKSSSVKPSIDPQQEMVLPQRKVESPPVMKLLPASVDDSTKKPVLGVSSSQARKRRKVVLVEQPEHKTVSRSPHAAKSGPVSQGRPLSADDIQKAKKRAFYMQSKYGKPQSKESKTDDGLHKQTDKVGVVASPSQVPLSPKIKEDKKCQLVPFPSNRQEDSIDSKLRVDLKGPLSLSLSLREKRKRVQVPWKTPAELKLNEAWRVGGGENSKEVDVQNNRNQREKQTIYHTLQEIPCNPKEPWDHEMNYDDMLTPQIPIEQQLDRKGAETPVAPNQSGNLKGGPTSSSYSNVEPDLELLAVLLKNPDLVFALTSGQAGSLPSEETVKLLDMIKKSGSNMPENINVTQGKVQVSLPSPTPSSEPRTSAWRTEAVKNPFIQQASAAATNVVSSSVHHPILHSNSPTIQTPSFSSSSDIGLSLTMKDNITTANASSVNLSSANSPLAKWFDGNSNLKPVPNLSVQEGFSNSFSHSHFLPSPTPPISFAHQPRGPNLMQTQPSYHNASLHSYPPKAQNQSDLRSQLNQNNYNAVAERNDYAYAGERFESWNPQNNPTRDNRNSSRRNFTESRMNAERNYRPEWSRQRGIRKWHNQRR 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0513 906 MobiDBLite consensus disorder prediction 857 871 - -
Sto8g0513 906 SUPERFAMILY Homeodomain-like 69 131 IPR009057 -
Sto8g0513 906 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 232 322 IPR035441 -
Sto8g0513 906 MobiDBLite consensus disorder prediction 368 385 - -
Sto8g0513 906 MobiDBLite consensus disorder prediction 423 437 - -
Sto8g0513 906 MobiDBLite consensus disorder prediction 585 602 - -
Sto8g0513 906 MobiDBLite consensus disorder prediction 317 402 - -
Sto8g0513 906 MobiDBLite consensus disorder prediction 872 898 - -
Sto8g0513 906 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 334 812 - -
Sto8g0513 906 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 2 334 - -
Sto8g0513 906 Gene3D - 69 126 - -
Sto8g0513 906 MobiDBLite consensus disorder prediction 415 437 - -
Sto8g0513 906 SMART HOX_1 69 131 IPR001356 GO:0003677
Sto8g0513 906 MobiDBLite consensus disorder prediction 807 831 - -
Sto8g0513 906 MobiDBLite consensus disorder prediction 578 602 - -
Sto8g0513 906 CDD homeodomain 70 126 IPR001356 GO:0003677
Sto8g0513 906 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Sto8g0513 906 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 334 812 - -
Sto8g0513 906 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 334 - -
Sto8g0513 906 MobiDBLite consensus disorder prediction 856 906 - -
Sto8g0513 906 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 228 317 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0513 Sto-Chr8 3135979 3143211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0513 474 718 Homeobox Transcription Factor Family AT4G02560 44.906 7.56e-46 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0513 - - gmx:100806633 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0513 8 3135979 3143211 Sto8g0513 8 3135979 3143211 ECH