Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0495 ATGGTTGAAACCAGGCGCAGCTCCTCCTCTTCCAAGCGTTCTCTCTCTTCGCCTCCTTCTTCCAACGTCAAACGATCgaaggtatttttttattgcttttCGGAAATTCTTGGTCAGGTCAACGAATCTGGAAATGAATCTCGAGAACCAGAGCTACGCCCGTCTGATCTGCCAGGTACCGATTCGTTGAAGGCTGTGGATGTGAGTGATGCGGTGTTACCTGAGAAATCTCCTGCCGTGCCTGTTGAAGGCGAGGCTGTGGTGTCGCCGCGGTCTTTAGGTGCGCTTGGCCGGTCAAAGAAACGTCCTACGAAATCCACTAAATCGGGCCCTAAGGCTGCATGGGGAAAGCTTCTTTCTCAGTGCTCTCAGAATCCTCACCTATCCATGTGCGGGCTCTTCACAGTTGGTCAAGGACGTCACTGTGATTTATGTCTTAAAGATCCATCTGTCAGTAATGTTTTGTGCAAATTGAGGCGCATAGAGCGTGGAGGTTCATCTCTAGCATTACTGGAAGTCATAGGAGGTAAAGGTGCTGTCCAAGTTAATGGCAGGAATCACCAAAAAAATTCCCATGTGATTTTAAGTGGTGGCGATGAGGTGGTCTTCAGTTCTTCTGGCAAGCATGCTTATATTTTTCAGCAGCTCACCAATAATAATATAACCGCAACAGGGGTGCCTTCTACTTTAAGTATTTTAGAAGCTCAAAGTTCTCCAATTAAGGGAATACACATTGAAGCTAGATCTGGGGACTCTTCGGCTGTTGCTGGAGCATCGATATTAGCGTCTTTATctaatattcataaagatttatCTCTCCTTCCACCCCCTGCAAAATCTGGTGATAATGTCCCACAGAATGCCGATGTTTCTTCACTACCTTCTGACCATGGGGATAACAATCGAGACAATGAATTGAAGGATACCACCAATAACGATGATCAAGCTGGAGTTGTTTCAGCTGAGAAAACTGTTCTTGCATCCTCTACTGCTGCCAATGAAAATCCTAGCCTTGACAGCATGGAAATGGATGCGGGTGCAGAGGCAGACATTGGGAAGGTAACTGGGGCTACCTATGAATTAAGGCCGTTGTTGCGCATTCTTGCTAGTTCTAGTGGTGAATTTGATATAAGTGGTAGCCTTTCCAAATTACTGGAAGAACGAAGGGATTTAAATATAAGGGAACTCCTTAAGGATGTTGATCCCCCAACAATATTGGCATCAACCAGGCGACAAGCTTTTAAGGAGAGTTTACAACAAGGCGTTCTATGTCCTGGTGATATTGATGTCTCATTTGAAAGTTTTCCATATTTTCTAAGTGATACAACAAAGAATGTTTTGATTGCTTCTACATACATTCATTTGAAGTGCAATGGTTTTGCAAAATATGCTTCAGATCTCCCTTCAGTGTGCCCACGAATAATGCTATCCGGTCCTGCTGGTTCGGAGATATATCAGGAAACTTTGTCCAAGGCGCTTGCTAAGCATTTTGGTGCCAGGCTGATGATTGTGGATTCTCTTTCATTGCCCGGTGGAGCATTACCCAAGGACTCTGATTCTGCTAAGGAAAGTTCTAGGCCTGAAAGAACATCTGTGTTTACAAAGCAAAGTTCACAGGCTGCGACTTTACAGCATAAGAAACCAACTTCTAGTGTTGATGCTGATATCATAGGTGGATCCACATTAAGTTCTCAGGCATCTAAGGGAACTACTCTAAAAACAGGTGATCGGGTAAAATTTGTTGGTAATGTTCCTTCAACTAGTATAACGCTAACAAATTATCCTTCTAGGGGACCAAGCTATGGCTCCCGGGGTAAAGTTCTTCTTGCTTTTGAAGAAAATGGATCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCGGATGGCAACGATCTTGGAGGCCTTTGTGAAGATGATCGTGGTTTCTTTTGTTCTGCAAATCATTTACTACGAGTGGATGGTTCTGGAGGGGATGACTCTGACAAGCTtgcaataaatgaaatttttgagGTTGCCTCCAATCAGAGTAAAAATGGTCCACTGGTGTTGTTCATGAAAGATATTGAGAAGGCAATTGTAGGAAACTCTGATGTTTTGAAGAGTAAACTTGAAAACTTGCAGCAGAATATTGTTGTAATTGGCTCACACACCCAGCCTGATAATCGCAAGGAGAAGACCCAGCCTGGTGGCCTTCTGTTTACAAAGTTCGGGAGCAATCAGACTGCCCTACTTGATCTTGCATTTCCGGATAACTTTAGTAGACTTCATGATAGAAGCAAGGAAACTCCCAAAACAATGAAGCAACTCAGTAGACTTTTCCCCAACAAAGTGACAATACAGCTACCTCAGGATGAGGCTTTGCTTTCTGATTGGAAACAGCAATTAGAACGTGATATTGAAACTATGAAAGCTCAGTCAAATATTGTCAGCATTCGTTCGGTTCTCAATAAGATTGGATTGGATTGCCCCGACATTGAGACCCTCTGCATTAAAGATCAAGCCCTAACGACTGAAAGTGTGGAAAAAATCATTGGATGGGCTATAAGCTATCATTTTATGCATTTATCTGAAGATACAATCAAAGACTCTAAGCTTGTGATATCTGCTGACAGCATTAAGTATGGGCTGAACATTCTACAGGGAATTCTGAGTGAAACCAAGAACTTAAAGAAATCACTGAAGGATGTGGTTACTGAGAATGAATTTGAGAAGAAACTTCTTGCTGATGTTATTCCACCCAGTGATATTGGGGTCACATTTGATGATATTGGAGCCTTAGAAAATGTGAAGGATACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTTTGTAAAGGGCAGTTGACTAAGCCTTGCAAGGGAATATTGCTCTTTGGGCCACCTGGCACCGGAAAAACAATGCTGGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATTAACATTTCAATGTCAAGCATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTACGTCAAAGCAGTCTTCTCTCTAGCAAGCAAAATTGCACCAAGTGTTATTTTTGTTGATGAGGTTGACAGCATGTTAGGAAGACGTGAGAATCCTGGTGAGCATGAGGCTATGCGTAAGATGAAGAATGAATTTATGGTGAACTGGGATGGTCTGCGCACAAAAGATAAAGAGCGTATACTTGTTCTTGCTGCTACAAATAGGCCATTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTGATGGTTAACTTGCCAGATGCTCCGAACAGAGAAAAAATTCTGAGAGTCATCTTAGCTAAAGAAGATTTGGCACCTGATGTTGAGTTGGAAGCAGTAGCAAACATGACTGACGGATATTCAGGAAGCGACTTAAAGAATCTGTGTGTCACAGCAGCTCACTGTCCAATACGAGAAATCttggagaaggaaaagaagGAGAGAACTTTGGCGTTGTCTGAGAACAGACCTTTACCTGCATTACGTAGCAGTGCTGACATCCGGCCCTTAAAGATGGAGGACTTCAAATATGCGCATGAGCAGGTGTGTGCAAGTGTGTCATCGGAGTCAACAAATATGAATGAGCTACTCCAATGGAATGACCTTTACGGAGAAGGTGGATCCAGAAAAATGAGATCTCTGAGCTATTTCATGTAA 3675 0.422 MVETRRSSSSSKRSLSSPPSSNVKRSKVFFYCFSEILGQVNESGNESREPELRPSDLPGTDSLKAVDVSDAVLPEKSPAVPVEGEAVVSPRSLGALGRSKKRPTKSTKSGPKAAWGKLLSQCSQNPHLSMCGLFTVGQGRHCDLCLKDPSVSNVLCKLRRIERGGSSLALLEVIGGKGAVQVNGRNHQKNSHVILSGGDEVVFSSSGKHAYIFQQLTNNNITATGVPSTLSILEAQSSPIKGIHIEARSGDSSAVAGASILASLSNIHKDLSLLPPPAKSGDNVPQNADVSSLPSDHGDNNRDNELKDTTNNDDQAGVVSAEKTVLASSTAANENPSLDSMEMDAGAEADIGKVTGATYELRPLLRILASSSGEFDISGSLSKLLEERRDLNIRELLKDVDPPTILASTRRQAFKESLQQGVLCPGDIDVSFESFPYFLSDTTKNVLIASTYIHLKCNGFAKYASDLPSVCPRIMLSGPAGSEIYQETLSKALAKHFGARLMIVDSLSLPGGALPKDSDSAKESSRPERTSVFTKQSSQAATLQHKKPTSSVDADIIGGSTLSSQASKGTTLKTGDRVKFVGNVPSTSITLTNYPSRGPSYGSRGKVLLAFEENGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGGDDSDKLAINEIFEVASNQSKNGPLVLFMKDIEKAIVGNSDVLKSKLENLQQNIVVIGSHTQPDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDEALLSDWKQQLERDIETMKAQSNIVSIRSVLNKIGLDCPDIETLCIKDQALTTESVEKIIGWAISYHFMHLSEDTIKDSKLVISADSIKYGLNILQGILSETKNLKKSLKDVVTENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLAPDVELEAVANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERTLALSENRPLPALRSSADIRPLKMEDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0495 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 919 1198 IPR027417 -
Sto8g0495 1224 Pfam ATPase family associated with various cellular activities (AAA) 960 1089 IPR003959 GO:0005524|GO:0016887
Sto8g0495 1224 CDD FHA 139 214 IPR000253 GO:0005515
Sto8g0495 1224 Gene3D - 99 222 - -
Sto8g0495 1224 MobiDBLite consensus disorder prediction 530 554 - -
Sto8g0495 1224 MobiDBLite consensus disorder prediction 41 63 - -
Sto8g0495 1224 MobiDBLite consensus disorder prediction 1 23 - -
Sto8g0495 1224 MobiDBLite consensus disorder prediction 91 112 - -
Sto8g0495 1224 SUPERFAMILY SMAD/FHA domain 132 207 IPR008984 GO:0005515
Sto8g0495 1224 Pfam AAA+ lid domain 1113 1149 IPR041569 -
Sto8g0495 1224 MobiDBLite consensus disorder prediction 296 310 - -
Sto8g0495 1224 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1224 - -
Sto8g0495 1224 MobiDBLite consensus disorder prediction 273 317 - -
Sto8g0495 1224 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1224 - -
Sto8g0495 1224 CDD AAA 958 1091 - -
Sto8g0495 1224 Gene3D - 918 1198 IPR027417 -
Sto8g0495 1224 SMART AAA_5 956 1093 IPR003593 -
Sto8g0495 1224 MobiDBLite consensus disorder prediction 514 554 - -
Sto8g0495 1224 Gene3D - 1092 1186 - -
Sto8g0495 1224 ProSitePatterns AAA-protein family signature. 1063 1082 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0495 Sto-Chr8 3046590 3056195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0495 955 1160 Calmodulin-binding Proteins AT3G56690 36.190 8.88e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0495 - - gmx:100801477 1880.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0495 8 3046590 3056195 Sto8g0495 8 3046590 3056195 ECH