Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0467 ATGGCTTCAAAGGTCTTGTTCAAAGCTGCATTCTCAATGTACCTTCTCCTTCCCTTCTTTGCATTCCTAGCTATTGCAGATAATTTCGAAAGCAACCCTATTCCTTCAGAAACCATATGCGATTCCACCCCAAACCCCTCTTATTGCAAAGCCCTGCTTCCTAAGCAAAATGCCAAAGTGCACGACTTTGGCAGATTCTCCCTTCAAAAGTCCTTATTTCAGTCTCGTAAGCTTTTGCAGTTAGCCAACTTTTATCTTCGTGATAAGTCCAGGTTCTCCCAGGGCACAATCCGTGCACTTGAAGATTGCATATTTCTCTCCGAGCTAAACGTGGAATACTTATCCAACTCCAACAAGTTTGTCATGAAGACTATCCAAACTGTTTCCACCTCCGAAGTTGATGATGCCCAATCCTTCCTCAGTGCCATCTTAACGAACCACCAGACATGTTTGGATGGTCTTATGACCACAGCTTCGGATTTGTCCATCAAGAATGGGCTTTTAGGCGCACTCTCTGAGGACACTAAGCTCCACACTCTGTCTCTGGCTCTGTTTACAAAAGGGTGGGTACatgagaagaagaacaagacaATGTGGGATTCCGTAGGGTGGCATTCGGGTTTCCGAAACGGTCGTTTACCTCTGAAGATGTCAAGCCGTGTGAGGTCCATCTATGAGTCATTGAGAGGGAGAGGAAGAGGCCTTCAGTCCAATGCCAACGACTCTGTCGTCGTTAGTGACATGGTGGTTGTTAGTGAGGACGGAAGTGGGAATTTCACTACTATCAACGACGCCATAGCTGCTGCTCCTAATAATAGTGCACCCAGTGATGGCTACTTCTTGATTTATATCACAAGAGGTGTGTATCAAGAATATGTAAGCATACCCAAAACCAAGAACAACTTGATGCTATTGGGAGATGGAATCAATCAAACTATTATCACCGGTAATCACAGTGTCGTCGATGGTTGGACAACTTTCAACTCACCAACATTTGCTGTGGTAGCAGCAGATTTCGTAGCGGTGAACATAACATTCAGGAACACAGCAGGGGCAATAAAAGAGCAAGCAGTGGCATTAAGAAGTGGAGCAGACATGTCGAGTTTCTACAGCTGCAGCTTCGAAGGGTATCAAGACACACTCTACACACACTCTATGCGCCAATTTTACagagagtgtgacatatatggCACCGTGGACTTCATATTCGGGAACGCAGCCGTTGTTTTACAAAACTGCAACATCTATCCTCGCTTACCCTTGAGTGGCCAATTCAACACCATAACAGCACAAGGTCGAACTGACATCAACCAGAACACAGGGACTAGCATTCAGAATGCTACTATAACTGCAGCCGATGATCTAGCTGGGAGTGTGAGTACAGTGGAGACGTACCTTGGGAGGCCCTGGAAACAGTACTCCAGGACGGTGTTTATGGAGAGTTTCATGGACAGTTTGATTAATAGTGCTGGGTGGCACGATTGGAATGGAAGTTTTGCATTGGACACGTTGTACTATGCAGAGTATAATAACAGGGGACCTGGTTCTGACACTACCAATAGAGTGACGTGGCCTGGTTACCATGTGATTAATGCCACCGATGCAGCTAATTTCACAGTGTCTAACTTCTTGCAGGGTGATGCATGGCTGCCTCAAACTGGTGTCCCATACTTGAGTGGATTGTGA 1686 0.4484 MASKVLFKAAFSMYLLLPFFAFLAIADNFESNPIPSETICDSTPNPSYCKALLPKQNAKVHDFGRFSLQKSLFQSRKLLQLANFYLRDKSRFSQGTIRALEDCIFLSELNVEYLSNSNKFVMKTIQTVSTSEVDDAQSFLSAILTNHQTCLDGLMTTASDLSIKNGLLGALSEDTKLHTLSLALFTKGWVHEKKNKTMWDSVGWHSGFRNGRLPLKMSSRVRSIYESLRGRGRGLQSNANDSVVVSDMVVVSEDGSGNFTTINDAIAAAPNNSAPSDGYFLIYITRGVYQEYVSIPKTKNNLMLLGDGINQTIITGNHSVVDGWTTFNSPTFAVVAADFVAVNITFRNTAGAIKEQAVALRSGADMSSFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPLSGQFNTITAQGRTDINQNTGTSIQNATITAADDLAGSVSTVETYLGRPWKQYSRTVFMESFMDSLINSAGWHDWNGSFALDTLYYAEYNNRGPGSDTTNRVTWPGYHVINATDAANFTVSNFLQGDAWLPQTGVPYLSGL 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0467 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 187 IPR035513 -
Sto8g0467 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 187 IPR035513 -
Sto8g0467 561 SMART PMEI_2 31 184 IPR006501 GO:0004857
Sto8g0467 561 PANTHER PECTINESTERASE 18 560 - -
Sto8g0467 561 Gene3D - 242 561 IPR012334 -
Sto8g0467 561 SUPERFAMILY Pectin lyase-like 244 560 IPR011050 -
Sto8g0467 561 Pfam Plant invertase/pectin methylesterase inhibitor 37 165 IPR006501 GO:0004857
Sto8g0467 561 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Sto8g0467 561 Pfam Pectinesterase 249 547 IPR000070 GO:0030599|GO:0042545
Sto8g0467 561 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 18 560 - -
Sto8g0467 561 CDD PMEI-like_3 38 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0467 Sto-Chr8 2880056 2888821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0467 36 561 Carbohydrate Esterase AT1G02810 58.984 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0467 K01051 - gmx:100813051 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0467 8 2880056 2888821 Sto8g0467 8 2880056 2888821 ECH