Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0461 ATGTGTGGCGGTGCTATCATCGCTGACTTCATCCCTCGCCACCGTGGCCGCCGCCTTACCGCCGCCGACCTCTGGCCTAACTCTTTCGGCAAGTCTAATGACTTGGGCTTCCATTATTCTCAACTCGACCACCACCAGGATCACTCTCTTCCCCTCAAATCATCCCATCCTTCTCCAGTTGATGAGGAAGCCGAGAAGCCCGTGAAGAGGCAGAGGAAGAACCTTTACAGAGGGATTCGACAACGTCCATGGGGGAAATGGGCGGCTGAGATTCGCGATCCCAGAAAGGGGGTTCGTGTTTGGCTTGGTACCTTCAACACCGCGGAAGAAGCAGCTAGAGCCTATGACAGAGAAGCTAGGAAAATCCGCGGCAAGAAAGCCAAAGTCAATTTCCCCAACGAAGACGATGCCTATTCCCTTCAAGCTCCTCGTCATAATCCATTACCACCCTCTAATTCAATTCCTCCTCTCTATCCACAACAATACAATGCTCCTAAGAGCTTGAACTTGGAATTTGGCTATGATCTGAACCAAGTAGGCACAATTCCTTCCCATGGATTATTCAACACCATATCTGGGGATGAACATTCAGGATCAGGATCAGGATCAGGGTCAGGATCAGAGGGTGCCTACTCCACAATGGAGTTCGTGGGCTCCAATCAGAATGTAGAGAGGTATTATGGTGAGGAAAGAAAAACGAACAAAGTGGTGGTGGAAGCTGAGGAGGAGAACGAAATACAGAAGCTATCGGAGGAGTTGATGGCATACGAGAACTACATGAAGTTCTATGAGATTCCATATTATGATGGCCAATCCACGGCCCCCAATAACGTTCAGGAAAGCGTGGTTGGTGATCTCTGGAGCTTCGATGATGAGGCCATTCCTGCTTCTGTCACCTCATCGGCTGTGTGA 912 0.4978 MCGGAIIADFIPRHRGRRLTAADLWPNSFGKSNDLGFHYSQLDHHQDHSLPLKSSHPSPVDEEAEKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDAYSLQAPRHNPLPPSNSIPPLYPQQYNAPKSLNLEFGYDLNQVGTIPSHGLFNTISGDEHSGSGSGSGSGSEGAYSTMEFVGSNQNVERYYGEERKTNKVVVEAEEENEIQKLSEELMAYENYMKFYEIPYYDGQSTAPNNVQESVVGDLWSFDDEAIPASVTSSAV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0461 303 Gene3D AP2/ERF domain 75 133 IPR036955 GO:0003700|GO:0006355
Sto8g0461 303 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Sto8g0461 303 CDD AP2 76 133 IPR001471 GO:0003700|GO:0006355
Sto8g0461 303 PANTHER DNA-BINDING DOMAIN 56 292 IPR044808 GO:0003700|GO:0009873
Sto8g0461 303 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Sto8g0461 303 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Sto8g0461 303 MobiDBLite consensus disorder prediction 190 210 - -
Sto8g0461 303 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Sto8g0461 303 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Sto8g0461 303 Coils Coil 239 259 - -
Sto8g0461 303 MobiDBLite consensus disorder prediction 46 69 - -
Sto8g0461 303 Pfam AP2 domain 76 124 IPR001471 GO:0003700|GO:0006355
Sto8g0461 303 PANTHER EREBP TRANSCRIPTION FACTOR 56 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0461 Sto-Chr8 2835339 2836342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0461 1 133 AP2-EREBP Transcription Factor Family AT3G16770 56.522 2.17e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto8g0461 AP2 9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0461 K09286 - gmx:100780763 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0461 8 2835339 2836342 Sto8g0461 8 2835339 2836342 ECH