Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0447 ATGGCCACCAGAAATCGAACTCTACTGTTCAGAAAGCACAGAGATGCTGTCAAGAGCGTGCGCGCCCCTTTGTCTTCCTCAGCATCAGGTTCCGGCGGTCCTGTAATTGAAATGGTGAGCACTTCACTTCTTCGTTCCAATCAATCTTCATATGCGCCCCTAAGCACCGAAGATCCAGGTCCCTCAAGTATTAGAGATGCATTTACTGTGGGATTGCCGCCAGCTTGGGTTGATGATTCTGAAGAAATAGCTACAAATATACAACGTGCTCGGGTTAAAATGTCTCAGTTACTCAAACTTCATGCAAAGGCATTAATGCCCTCCTTTGGTGATGGCAAAGAAGATCAACTTCAGATTGAGACTCTCACCCAGGAGATTACAGCTCTCTTGAGAAAATCTGAAATGAAGCTAAAAAGACTTTCTGCGGCTAGTGGATCCCCAGAGGATTCAAATGTCAGAAAAAATGTgcagCGCTCCCTTGCTACAGACCTTCAGAACCTCTCCATGGACCTCCGGCGAAAGCAGTCAACATACTTGAAACGGTTGCGGCAGCAAAAAGAGGGTTATGATGGGGTTGACTTGGAGATGAACTTGAATGGGAATAAATTCAGTCTGCAGGATGATGAATTTGGTGATGTGGGTTTCAGTGAACACCAAAGGACAAAGCTAAAGAAGAGTGAGCAGTTTTCGgaggaaagggaaagagaaattgAACAGGTTACCGAATCAGTGAACGAACTGGCTCAGATCATGAAGGATCTGTCTGTACTTGTGATAGATCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAAAGTGTTTCTACATCCGTTGAAGAGGGCTTTAAGCAGTTGGAAAAGGCAGAGAGAACGCAGAAAAAAGGAGGAATGGTTATGTGTGCAACAGTGCTTGTTATAATGTGCTTCATCATGCTAGTCCTCTTGGTACTCAAGGAGATATTATTTTAG 972 0.429 MATRNRTLLFRKHRDAVKSVRAPLSSSASGSGGPVIEMVSTSLLRSNQSSYAPLSTEDPGPSSIRDAFTVGLPPAWVDDSEEIATNIQRARVKMSQLLKLHAKALMPSFGDGKEDQLQIETLTQEITALLRKSEMKLKRLSAASGSPEDSNVRKNVQRSLATDLQNLSMDLRRKQSTYLKRLRQQKEGYDGVDLEMNLNGNKFSLQDDEFGDVGFSEHQRTKLKKSEQFSEEREREIEQVTESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQSVSTSVEEGFKQLEKAERTQKKGGMVMCATVLVIMCFIMLVLLVLKEILF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0447 323 PANTHER SYNTAXIN 1 318 IPR045242 -
Sto8g0447 323 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 318 - -
Sto8g0447 323 SUPERFAMILY t-snare proteins 72 282 IPR010989 GO:0016020|GO:0016192
Sto8g0447 323 SMART SynN_4 67 183 IPR006011 GO:0016020
Sto8g0447 323 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 227 289 IPR000727 -
Sto8g0447 323 SMART tSNARE_6 222 289 IPR000727 -
Sto8g0447 323 Gene3D - 73 281 - -
Sto8g0447 323 CDD SNARE_syntaxin16 231 288 - -
Sto8g0447 323 Pfam SNARE domain 263 315 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0447 Sto-Chr8 2773300 2776690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0447 1 323 SNARE and Associated Proteins AT5G26980 72.866 2.33e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0447 K08489 - gmx:100803629 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0447 8 2773300 2776690 Sto8g0447 8 2773300 2776690 ECH